Protein–RNA interactions for Protein: P09016

HOXD4, Homeobox protein Hox-D4, humanhuman

Predicted RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4P09016 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXD4P09016 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXD4P09016 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXD4P09016 RNU6-171P-201ENST00000384354 107 ntBASIC5.1□□□□□ -1.59
HOXD4P09016 ZNF736P10Y-201ENST00000403990 1110 ntBASIC5.1□□□□□ -1.59
HOXD4P09016 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.1□□□□□ -1.59
HOXD4P09016 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.1□□□□□ -1.59
HOXD4P09016 NACAP7-201ENST00000407371 609 ntBASIC5.1□□□□□ -1.59
HOXD4P09016 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.1□□□□□ -1.59
HOXD4P09016 PTMAP6-201ENST00000439110 327 ntBASIC5.1□□□□□ -1.59
HOXD4P09016 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HOXD4P09016 AC023271.1-201ENST00000445936 1090 ntBASIC5.1□□□□□ -1.59
HOXD4P09016 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.1□□□□□ -1.59
HOXD4P09016 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
HOXD4P09016 RN7SL197P-201ENST00000466981 299 ntBASIC5.1□□□□□ -1.59
HOXD4P09016 AC069304.1-201ENST00000491593 704 ntBASIC5.1□□□□□ -1.59
HOXD4P09016 AC093763.2-201ENST00000505334 1223 ntBASIC5.1□□□□□ -1.59
HOXD4P09016 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HOXD4P09016 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.1□□□□□ -1.59
HOXD4P09016 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5.1□□□□□ -1.59
HOXD4P09016 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.1□□□□□ -1.59
HOXD4P09016 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
HOXD4P09016 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.1□□□□□ -1.59
HOXD4P09016 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HOXD4P09016 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC5.1□□□□□ -1.59
HOXD4P09016 MIR4700-201ENST00000578311 74 ntBASIC5.1□□□□□ -1.59
HOXD4P09016 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.1□□□□□ -1.59
HOXD4P09016 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.1□□□□□ -1.59
HOXD4P09016 FKBP1AP1-201ENST00000594588 318 ntBASIC5.1□□□□□ -1.59
HOXD4P09016 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.1□□□□□ -1.59
HOXD4P09016 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.1□□□□□ -1.59
HOXD4P09016 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXD4P09016 AL078621.3-201ENST00000623707 2042 ntBASIC5.1□□□□□ -1.59
HOXD4P09016 AC005618.4-201ENST00000625053 554 ntBASIC5.1□□□□□ -1.59
HOXD4P09016 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.1□□□□□ -1.59
HOXD4P09016 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.1□□□□□ -1.59
HOXD4P09016 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.1□□□□□ -1.59
HOXD4P09016 CASC19-222ENST00000641321 1173 ntBASIC5.1□□□□□ -1.59
HOXD4P09016 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
HOXD4P09016 CASC19-264ENST00000641912 1184 ntBASIC5.1□□□□□ -1.59
HOXD4P09016 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HOXD4P09016 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HOXD4P09016 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.1□□□□□ -1.59
HOXD4P09016 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HOXD4P09016 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.09□□□□□ -1.59
HOXD4P09016 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.09□□□□□ -1.59
HOXD4P09016 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HOXD4P09016 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
HOXD4P09016 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
HOXD4P09016 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
HOXD4P09016 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
HOXD4P09016 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.09□□□□□ -1.59
HOXD4P09016 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
HOXD4P09016 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
HOXD4P09016 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.09□□□□□ -1.59
HOXD4P09016 AL133173.1-201ENST00000423458 397 ntBASIC5.09□□□□□ -1.59
HOXD4P09016 AC244033.1-201ENST00000426826 870 ntBASIC5.09□□□□□ -1.59
HOXD4P09016 NPM1P22-201ENST00000427761 952 ntBASIC5.09□□□□□ -1.59
HOXD4P09016 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.09□□□□□ -1.59
HOXD4P09016 NFYAP1-201ENST00000431953 972 ntBASIC5.09□□□□□ -1.59
HOXD4P09016 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.09□□□□□ -1.59
HOXD4P09016 AL161722.1-201ENST00000446972 1032 ntBASIC5.09□□□□□ -1.59
HOXD4P09016 AC073072.2-201ENST00000447425 348 ntBASIC5.09□□□□□ -1.59
HOXD4P09016 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.09□□□□□ -1.59
HOXD4P09016 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.09□□□□□ -1.59
HOXD4P09016 AC100832.1-201ENST00000471945 383 ntBASIC5.09□□□□□ -1.59
HOXD4P09016 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC5.09□□□□□ -1.59
HOXD4P09016 AC073610.1-201ENST00000489971 396 ntBASIC5.09□□□□□ -1.59
HOXD4P09016 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.09□□□□□ -1.59
HOXD4P09016 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.09□□□□□ -1.59
HOXD4P09016 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.09□□□□□ -1.59
HOXD4P09016 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HOXD4P09016 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.09□□□□□ -1.59
HOXD4P09016 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC5.09□□□□□ -1.59
HOXD4P09016 AC105384.2-201ENST00000508433 640 ntBASIC5.09□□□□□ -1.59
HOXD4P09016 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.09□□□□□ -1.59
HOXD4P09016 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.09□□□□□ -1.59
HOXD4P09016 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.09□□□□□ -1.59
HOXD4P09016 AC004825.1-201ENST00000555068 586 ntBASIC5.09□□□□□ -1.59
HOXD4P09016 AL390334.1-201ENST00000556395 450 ntBASIC5.09□□□□□ -1.59
HOXD4P09016 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC5.09□□□□□ -1.59
HOXD4P09016 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.09□□□□□ -1.59
HOXD4P09016 DPRXP4-201ENST00000578053 568 ntBASIC5.09□□□□□ -1.59
HOXD4P09016 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.09□□□□□ -1.59
HOXD4P09016 AC239803.2-201ENST00000610161 430 ntBASIC5.09□□□□□ -1.59
HOXD4P09016 MIR7155-201ENST00000615925 56 ntBASIC5.09□□□□□ -1.59
HOXD4P09016 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.09□□□□□ -1.59
HOXD4P09016 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.09□□□□□ -1.59
HOXD4P09016 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.09□□□□□ -1.59
HOXD4P09016 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.09□□□□□ -1.59
HOXD4P09016 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
HOXD4P09016 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HOXD4P09016 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HOXD4P09016 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
HOXD4P09016 SRRM1P3-201ENST00000426911 2678 ntBASIC5.09□□□□□ -1.6
HOXD4P09016 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
HOXD4P09016 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
HOXD4P09016 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.08□□□□□ -1.6
HOXD4P09016 AC009962.1-201ENST00000567327 3813 ntBASIC5.08□□□□□ -1.6
HOXD4P09016 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms