Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 OR8G3P-202ENST00000641572 1255 ntBASIC5.1□□□□□ -1.59
MT-ND1P03886 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
MT-ND1P03886 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
MT-ND1P03886 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.1□□□□□ -1.59
MT-ND1P03886 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
MT-ND1P03886 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
MT-ND1P03886 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.1□□□□□ -1.59
MT-ND1P03886 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
MT-ND1P03886 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
MT-ND1P03886 AL731532.2-201ENST00000623542 1953 ntBASIC5.09□□□□□ -1.59
MT-ND1P03886 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.09□□□□□ -1.59
MT-ND1P03886 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
MT-ND1P03886 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
MT-ND1P03886 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.09□□□□□ -1.59
MT-ND1P03886 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
MT-ND1P03886 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.09□□□□□ -1.59
MT-ND1P03886 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
MT-ND1P03886 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.59
MT-ND1P03886 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
MT-ND1P03886 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
MT-ND1P03886 OR7E101P-201ENST00000400428 513 ntBASIC5.09□□□□□ -1.59
MT-ND1P03886 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.09□□□□□ -1.59
MT-ND1P03886 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.09□□□□□ -1.59
MT-ND1P03886 BX323845.3-201ENST00000428215 527 ntBASIC5.09□□□□□ -1.59
MT-ND1P03886 HSPD1P12-201ENST00000429127 1069 ntBASIC5.09□□□□□ -1.59
MT-ND1P03886 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
MT-ND1P03886 AL358876.1-201ENST00000453364 1075 ntBASIC5.09□□□□□ -1.59
MT-ND1P03886 YRDCP3-201ENST00000456507 480 ntBASIC5.09□□□□□ -1.59
MT-ND1P03886 ACA64.1-201ENST00000459171 127 ntBASIC5.09□□□□□ -1.59
MT-ND1P03886 AC005165.2-201ENST00000466070 380 ntBASIC5.09□□□□□ -1.59
MT-ND1P03886 RPS3AP15-201ENST00000483874 781 ntBASIC5.09□□□□□ -1.59
MT-ND1P03886 AL049874.2-201ENST00000492636 288 ntBASIC5.09□□□□□ -1.59
MT-ND1P03886 ENPP7P11-201ENST00000505915 627 ntBASIC5.09□□□□□ -1.59
MT-ND1P03886 AC098976.1-201ENST00000513014 541 ntBASIC5.09□□□□□ -1.59
MT-ND1P03886 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.09□□□□□ -1.59
MT-ND1P03886 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC5.09□□□□□ -1.59
MT-ND1P03886 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.09□□□□□ -1.59
MT-ND1P03886 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.09□□□□□ -1.59
MT-ND1P03886 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.09□□□□□ -1.59
MT-ND1P03886 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.09□□□□□ -1.59
MT-ND1P03886 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.09□□□□□ -1.59
MT-ND1P03886 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
MT-ND1P03886 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.09□□□□□ -1.59
MT-ND1P03886 AC025574.2-201ENST00000615621 514 ntBASIC5.09□□□□□ -1.59
MT-ND1P03886 AC244100.4-201ENST00000617747 388 ntBASIC5.09□□□□□ -1.59
MT-ND1P03886 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.09□□□□□ -1.59
MT-ND1P03886 uc_338.7-201ENST00000621834 124 ntBASIC5.09□□□□□ -1.59
MT-ND1P03886 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
MT-ND1P03886 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.09□□□□□ -1.59
MT-ND1P03886 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
MT-ND1P03886 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.09□□□□□ -1.59
MT-ND1P03886 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.09□□□□□ -1.59
MT-ND1P03886 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
MT-ND1P03886 AC093591.2-201ENST00000565254 3843 ntBASIC5.09□□□□□ -1.6
MT-ND1P03886 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
MT-ND1P03886 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
MT-ND1P03886 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
MT-ND1P03886 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
MT-ND1P03886 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
MT-ND1P03886 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
MT-ND1P03886 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.08□□□□□ -1.6
MT-ND1P03886 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
MT-ND1P03886 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.08□□□□□ -1.6
MT-ND1P03886 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
MT-ND1P03886 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.08□□□□□ -1.6
MT-ND1P03886 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
MT-ND1P03886 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
MT-ND1P03886 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
MT-ND1P03886 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
MT-ND1P03886 OR7E25P-201ENST00000344844 931 ntBASIC5.08□□□□□ -1.6
MT-ND1P03886 SNORA64.1-201ENST00000362600 132 ntBASIC5.08□□□□□ -1.6
MT-ND1P03886 RNU6-249P-201ENST00000363016 102 ntBASIC5.08□□□□□ -1.6
MT-ND1P03886 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.08□□□□□ -1.6
MT-ND1P03886 RNU2-18P-201ENST00000411224 162 ntBASIC5.08□□□□□ -1.6
MT-ND1P03886 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.08□□□□□ -1.6
MT-ND1P03886 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.08□□□□□ -1.6
MT-ND1P03886 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.08□□□□□ -1.6
MT-ND1P03886 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
MT-ND1P03886 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.08□□□□□ -1.6
MT-ND1P03886 AC021660.1-201ENST00000465006 554 ntBASIC5.08□□□□□ -1.6
MT-ND1P03886 AC107015.1-201ENST00000466902 747 ntBASIC5.08□□□□□ -1.6
MT-ND1P03886 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.08□□□□□ -1.6
MT-ND1P03886 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.08□□□□□ -1.6
MT-ND1P03886 EIF3KP3-201ENST00000514461 639 ntBASIC5.08□□□□□ -1.6
MT-ND1P03886 AC100784.1-201ENST00000522790 310 ntBASIC5.08□□□□□ -1.6
MT-ND1P03886 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.08□□□□□ -1.6
MT-ND1P03886 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC5.08□□□□□ -1.6
MT-ND1P03886 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.08□□□□□ -1.6
MT-ND1P03886 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.08□□□□□ -1.6
MT-ND1P03886 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.08□□□□□ -1.6
MT-ND1P03886 AC006363.1-201ENST00000603806 463 ntBASIC5.08□□□□□ -1.6
MT-ND1P03886 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.08□□□□□ -1.6
MT-ND1P03886 AC244107.2-201ENST00000611773 76 ntBASIC5.08□□□□□ -1.6
MT-ND1P03886 AL596275.2-207ENST00000641188 675 ntBASIC5.08□□□□□ -1.6
MT-ND1P03886 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
MT-ND1P03886 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
MT-ND1P03886 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
MT-ND1P03886 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.08□□□□□ -1.6
MT-ND1P03886 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
MT-ND1P03886 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms