Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
NKX2-2O95096 RNU4-74P-201ENST00000411280 161 ntBASIC5.27□□□□□ -1.57
NKX2-2O95096 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.27□□□□□ -1.57
NKX2-2O95096 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.27□□□□□ -1.57
NKX2-2O95096 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.27□□□□□ -1.57
NKX2-2O95096 AL512637.2-201ENST00000431287 1256 ntBASIC5.27□□□□□ -1.57
NKX2-2O95096 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC5.27□□□□□ -1.57
NKX2-2O95096 MTCYBP12-201ENST00000440559 1134 ntBASIC5.27□□□□□ -1.57
NKX2-2O95096 RNFT1P2-201ENST00000443064 757 ntBASIC5.27□□□□□ -1.57
NKX2-2O95096 HMGN1P2-201ENST00000445197 310 ntBASIC5.27□□□□□ -1.57
NKX2-2O95096 MOB1AP2-201ENST00000446060 614 ntBASIC5.27□□□□□ -1.57
NKX2-2O95096 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.27□□□□□ -1.57
NKX2-2O95096 RPS23P9-201ENST00000448848 438 ntBASIC5.27□□□□□ -1.57
NKX2-2O95096 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.27□□□□□ -1.57
NKX2-2O95096 SNORD125-201ENST00000459538 96 ntBASIC5.27□□□□□ -1.57
NKX2-2O95096 AC107015.1-201ENST00000466902 747 ntBASIC5.27□□□□□ -1.57
NKX2-2O95096 SYT14P1-201ENST00000481459 721 ntBASIC5.27□□□□□ -1.57
NKX2-2O95096 RPS3AP15-201ENST00000483874 781 ntBASIC5.27□□□□□ -1.57
NKX2-2O95096 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NKX2-2O95096 GLUD1P3-202ENST00000508551 200 ntBASIC5.27□□□□□ -1.57
NKX2-2O95096 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC5.27□□□□□ -1.57
NKX2-2O95096 AC006499.4-201ENST00000510947 694 ntBASIC5.27□□□□□ -1.57
NKX2-2O95096 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.27□□□□□ -1.57
NKX2-2O95096 HAUS1P3-201ENST00000523909 662 ntBASIC5.27□□□□□ -1.57
NKX2-2O95096 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.27□□□□□ -1.57
NKX2-2O95096 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.27□□□□□ -1.57
NKX2-2O95096 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.27□□□□□ -1.57
NKX2-2O95096 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.27□□□□□ -1.57
NKX2-2O95096 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC5.27□□□□□ -1.57
NKX2-2O95096 DPPA2P4-201ENST00000563717 878 ntBASIC5.27□□□□□ -1.57
NKX2-2O95096 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.27□□□□□ -1.57
NKX2-2O95096 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
NKX2-2O95096 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.27□□□□□ -1.57
NKX2-2O95096 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.27□□□□□ -1.57
NKX2-2O95096 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC5.27□□□□□ -1.57
NKX2-2O95096 MTATP6P2-201ENST00000603319 678 ntBASIC5.27□□□□□ -1.57
NKX2-2O95096 ABI1P1-201ENST00000603375 1120 ntBASIC5.27□□□□□ -1.57
NKX2-2O95096 AL135786.2-201ENST00000608422 615 ntBASIC5.27□□□□□ -1.57
NKX2-2O95096 MIR8084-201ENST00000614105 89 ntBASIC5.27□□□□□ -1.57
NKX2-2O95096 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
NKX2-2O95096 RN7SL544P-201ENST00000617232 284 ntBASIC5.27□□□□□ -1.57
NKX2-2O95096 RN7SL763P-201ENST00000620922 284 ntBASIC5.27□□□□□ -1.57
NKX2-2O95096 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NKX2-2O95096 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
NKX2-2O95096 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NKX2-2O95096 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
NKX2-2O95096 GTF2IP4-201ENST00000453092 2054 ntBASIC5.27□□□□□ -1.57
NKX2-2O95096 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.27□□□□□ -1.57
NKX2-2O95096 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.26□□□□□ -1.57
NKX2-2O95096 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
NKX2-2O95096 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
NKX2-2O95096 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
NKX2-2O95096 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NKX2-2O95096 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.26□□□□□ -1.57
NKX2-2O95096 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NKX2-2O95096 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NKX2-2O95096 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NKX2-2O95096 AP002512.4-202ENST00000641599 4530 ntBASIC5.26□□□□□ -1.57
NKX2-2O95096 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NKX2-2O95096 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.26□□□□□ -1.57
NKX2-2O95096 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NKX2-2O95096 OR52B3P-201ENST00000314715 928 ntBASIC5.26□□□□□ -1.57
NKX2-2O95096 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.26□□□□□ -1.57
NKX2-2O95096 MIR375-201ENST00000362103 64 ntBASIC5.26□□□□□ -1.57
NKX2-2O95096 SNORA64.1-201ENST00000362600 132 ntBASIC5.26□□□□□ -1.57
NKX2-2O95096 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
NKX2-2O95096 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
NKX2-2O95096 AC005042.1-201ENST00000393397 800 ntBASIC5.26□□□□□ -1.57
NKX2-2O95096 AL035405.1-201ENST00000400795 710 ntBASIC5.26□□□□□ -1.57
NKX2-2O95096 AC096921.1-201ENST00000411661 375 ntBASIC5.26□□□□□ -1.57
NKX2-2O95096 NME1P1-201ENST00000420914 382 ntBASIC5.26□□□□□ -1.57
NKX2-2O95096 AL606495.1-201ENST00000422100 813 ntBASIC5.26□□□□□ -1.57
NKX2-2O95096 OR5W1P-201ENST00000423705 938 ntBASIC5.26□□□□□ -1.57
NKX2-2O95096 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
NKX2-2O95096 AC127526.2-201ENST00000426436 775 ntBASIC5.26□□□□□ -1.57
NKX2-2O95096 AL160175.1-201ENST00000428124 247 ntBASIC5.26□□□□□ -1.57
NKX2-2O95096 TMEM183AP1-205ENST00000432739 290 ntBASIC5.26□□□□□ -1.57
NKX2-2O95096 HMGB3P24-201ENST00000433260 622 ntBASIC5.26□□□□□ -1.57
NKX2-2O95096 AL512661.1-201ENST00000434586 1253 ntBASIC5.26□□□□□ -1.57
NKX2-2O95096 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.26□□□□□ -1.57
NKX2-2O95096 RPL5P10-201ENST00000445207 894 ntBASIC5.26□□□□□ -1.57
NKX2-2O95096 LDHBP2-201ENST00000456969 1005 ntBASIC5.26□□□□□ -1.57
NKX2-2O95096 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.26□□□□□ -1.57
NKX2-2O95096 RPS23P6-201ENST00000466136 431 ntBASIC5.26□□□□□ -1.57
NKX2-2O95096 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.26□□□□□ -1.57
NKX2-2O95096 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
NKX2-2O95096 RPS17P5-201ENST00000498293 408 ntBASIC5.26□□□□□ -1.57
NKX2-2O95096 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.26□□□□□ -1.57
NKX2-2O95096 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.26□□□□□ -1.57
NKX2-2O95096 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.26□□□□□ -1.57
NKX2-2O95096 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.26□□□□□ -1.57
NKX2-2O95096 HSPE1P2-201ENST00000554777 306 ntBASIC5.26□□□□□ -1.57
NKX2-2O95096 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.26□□□□□ -1.57
NKX2-2O95096 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.26□□□□□ -1.57
NKX2-2O95096 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.26□□□□□ -1.57
NKX2-2O95096 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.26□□□□□ -1.57
NKX2-2O95096 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.26□□□□□ -1.57
NKX2-2O95096 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.26□□□□□ -1.57
NKX2-2O95096 AC015802.2-201ENST00000589690 189 ntBASIC5.26□□□□□ -1.57
NKX2-2O95096 AC079880.2-201ENST00000603790 1213 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms