Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.68□□□□□ -1.5
SMAD6O43541 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SMAD6O43541 UBE2V1P6-201ENST00000430840 422 ntBASIC5.68□□□□□ -1.5
SMAD6O43541 AC242426.1-201ENST00000435270 960 ntBASIC5.68□□□□□ -1.5
SMAD6O43541 OR6D1P-201ENST00000436165 939 ntBASIC5.68□□□□□ -1.5
SMAD6O43541 AL117351.1-201ENST00000438864 766 ntBASIC5.68□□□□□ -1.5
SMAD6O43541 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.68□□□□□ -1.5
SMAD6O43541 RPS26P39-201ENST00000469206 341 ntBASIC5.68□□□□□ -1.5
SMAD6O43541 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.68□□□□□ -1.5
SMAD6O43541 AC090058.1-201ENST00000498788 435 ntBASIC5.68□□□□□ -1.5
SMAD6O43541 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.68□□□□□ -1.5
SMAD6O43541 ATP5LP3-201ENST00000514223 304 ntBASIC5.68□□□□□ -1.5
SMAD6O43541 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC5.68□□□□□ -1.5
SMAD6O43541 RN7SKP5-201ENST00000517045 272 ntBASIC5.68□□□□□ -1.5
SMAD6O43541 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SMAD6O43541 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.68□□□□□ -1.5
SMAD6O43541 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.68□□□□□ -1.5
SMAD6O43541 AC025857.1-201ENST00000525252 377 ntBASIC5.68□□□□□ -1.5
SMAD6O43541 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC5.68□□□□□ -1.5
SMAD6O43541 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.68□□□□□ -1.5
SMAD6O43541 AC015720.2-201ENST00000567709 334 ntBASIC5.68□□□□□ -1.5
SMAD6O43541 MIR4489-201ENST00000578869 62 ntBASIC5.68□□□□□ -1.5
SMAD6O43541 MIR3176-201ENST00000582210 90 ntBASIC5.68□□□□□ -1.5
SMAD6O43541 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC5.68□□□□□ -1.5
SMAD6O43541 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.68□□□□□ -1.5
SMAD6O43541 AL360012.1-201ENST00000602813 131 ntBASIC5.68□□□□□ -1.5
SMAD6O43541 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC5.68□□□□□ -1.5
SMAD6O43541 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.68□□□□□ -1.5
SMAD6O43541 AC079395.2-201ENST00000610982 737 ntBASIC5.68□□□□□ -1.5
SMAD6O43541 AC007204.2-201ENST00000615022 616 ntBASIC5.68□□□□□ -1.5
SMAD6O43541 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.68□□□□□ -1.5
SMAD6O43541 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SMAD6O43541 AC020656.2-201ENST00000613291 5309 ntBASIC5.68□□□□□ -1.5
SMAD6O43541 AC025470.1-201ENST00000510053 2032 ntBASIC5.68□□□□□ -1.5
SMAD6O43541 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
SMAD6O43541 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.68□□□□□ -1.5
SMAD6O43541 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SMAD6O43541 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.68□□□□□ -1.5
SMAD6O43541 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SMAD6O43541 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SMAD6O43541 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.68□□□□□ -1.5
SMAD6O43541 AC232271.1-201ENST00000602455 2715 ntBASIC5.68□□□□□ -1.5
SMAD6O43541 MTND4P21-201ENST00000453886 1357 ntBASIC5.67□□□□□ -1.5
SMAD6O43541 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
SMAD6O43541 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SMAD6O43541 AL355488.2-201ENST00000609909 2850 ntBASIC5.67□□□□□ -1.5
SMAD6O43541 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.67□□□□□ -1.5
SMAD6O43541 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.67□□□□□ -1.5
SMAD6O43541 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SMAD6O43541 RNU6-249P-201ENST00000363016 102 ntBASIC5.67□□□□□ -1.5
SMAD6O43541 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.67□□□□□ -1.5
SMAD6O43541 KRT8P51-201ENST00000438938 274 ntBASIC5.67□□□□□ -1.5
SMAD6O43541 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SMAD6O43541 FCF1P6-201ENST00000456841 595 ntBASIC5.67□□□□□ -1.5
SMAD6O43541 PDCL3P4-201ENST00000489621 720 ntBASIC5.67□□□□□ -1.5
SMAD6O43541 UBE2V1P12-201ENST00000503954 474 ntBASIC5.67□□□□□ -1.5
SMAD6O43541 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC5.67□□□□□ -1.5
SMAD6O43541 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.67□□□□□ -1.5
SMAD6O43541 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
SMAD6O43541 AC016550.3-201ENST00000515706 767 ntBASIC5.67□□□□□ -1.5
SMAD6O43541 AC138701.1-201ENST00000524329 714 ntBASIC5.67□□□□□ -1.5
SMAD6O43541 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.67□□□□□ -1.5
SMAD6O43541 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC5.67□□□□□ -1.5
SMAD6O43541 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SMAD6O43541 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.67□□□□□ -1.5
SMAD6O43541 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.67□□□□□ -1.5
SMAD6O43541 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.67□□□□□ -1.5
SMAD6O43541 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.67□□□□□ -1.5
SMAD6O43541 AL713998.2-201ENST00000604538 1198 ntBASIC5.67□□□□□ -1.5
SMAD6O43541 AC010245.2-201ENST00000606908 1167 ntBASIC5.67□□□□□ -1.5
SMAD6O43541 AC090912.3-201ENST00000609775 533 ntBASIC5.67□□□□□ -1.5
SMAD6O43541 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
SMAD6O43541 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SMAD6O43541 HSPA8P19-201ENST00000505359 1517 ntBASIC5.67□□□□□ -1.5
SMAD6O43541 AL591135.1-201ENST00000401578 5914 ntBASIC5.67□□□□□ -1.5
SMAD6O43541 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
SMAD6O43541 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
SMAD6O43541 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.67□□□□□ -1.5
SMAD6O43541 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SMAD6O43541 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SMAD6O43541 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
SMAD6O43541 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SMAD6O43541 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
SMAD6O43541 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SMAD6O43541 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SMAD6O43541 MTCO1P15-201ENST00000529569 1526 ntBASIC5.66□□□□□ -1.5
SMAD6O43541 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SMAD6O43541 AC007618.1-201ENST00000366455 732 ntBASIC5.66□□□□□ -1.5
SMAD6O43541 RPL11P3-201ENST00000395256 523 ntBASIC5.66□□□□□ -1.5
SMAD6O43541 AL009179.1-201ENST00000406085 265 ntBASIC5.66□□□□□ -1.5
SMAD6O43541 AL356968.2-201ENST00000412769 1257 ntBASIC5.66□□□□□ -1.5
SMAD6O43541 RNGTTP1-201ENST00000420965 728 ntBASIC5.66□□□□□ -1.5
SMAD6O43541 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SMAD6O43541 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.66□□□□□ -1.5
SMAD6O43541 AL590399.2-201ENST00000427536 309 ntBASIC5.66□□□□□ -1.5
SMAD6O43541 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.66□□□□□ -1.5
SMAD6O43541 ARAFP2-201ENST00000440565 559 ntBASIC5.66□□□□□ -1.5
SMAD6O43541 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.66□□□□□ -1.5
SMAD6O43541 RAD1P2-201ENST00000446414 663 ntBASIC5.66□□□□□ -1.5
SMAD6O43541 AL606517.1-201ENST00000446914 387 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms