Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC4.48□□□□□ -1.69
SDCBPO00560 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.48□□□□□ -1.69
SDCBPO00560 AC064862.4-201ENST00000442180 334 ntBASIC4.48□□□□□ -1.69
SDCBPO00560 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.48□□□□□ -1.69
SDCBPO00560 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.48□□□□□ -1.69
SDCBPO00560 AC022133.1-201ENST00000490961 571 ntBASIC4.48□□□□□ -1.69
SDCBPO00560 USP9YP2-201ENST00000504503 1000 ntBASIC4.48□□□□□ -1.69
SDCBPO00560 USP9YP1-201ENST00000513521 1002 ntBASIC4.48□□□□□ -1.69
SDCBPO00560 TMEM97P2-201ENST00000517841 403 ntBASIC4.48□□□□□ -1.69
SDCBPO00560 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.48□□□□□ -1.69
SDCBPO00560 AC022826.1-201ENST00000519383 805 ntBASIC4.48□□□□□ -1.69
SDCBPO00560 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.48□□□□□ -1.69
SDCBPO00560 AC006349.1-201ENST00000555526 235 ntBASIC4.48□□□□□ -1.69
SDCBPO00560 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.48□□□□□ -1.69
SDCBPO00560 MIR4505-201ENST00000582238 73 ntBASIC4.48□□□□□ -1.69
SDCBPO00560 AC006363.1-201ENST00000603806 463 ntBASIC4.48□□□□□ -1.69
SDCBPO00560 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC4.48□□□□□ -1.69
SDCBPO00560 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC4.48□□□□□ -1.69
SDCBPO00560 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.48□□□□□ -1.69
SDCBPO00560 AC109583.2-201ENST00000617367 129 ntBASIC4.48□□□□□ -1.69
SDCBPO00560 AC132068.1-201ENST00000623805 459 ntBASIC4.48□□□□□ -1.69
SDCBPO00560 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.48□□□□□ -1.69
SDCBPO00560 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC4.48□□□□□ -1.69
SDCBPO00560 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
SDCBPO00560 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
SDCBPO00560 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SDCBPO00560 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SDCBPO00560 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.48□□□□□ -1.69
SDCBPO00560 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
SDCBPO00560 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
SDCBPO00560 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
SDCBPO00560 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
SDCBPO00560 AC100778.3-201ENST00000580060 1750 ntBASIC4.48□□□□□ -1.69
SDCBPO00560 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SDCBPO00560 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SDCBPO00560 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
SDCBPO00560 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
SDCBPO00560 AC063923.1-201ENST00000478982 1619 ntBASIC4.47□□□□□ -1.69
SDCBPO00560 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SDCBPO00560 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
SDCBPO00560 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SDCBPO00560 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SDCBPO00560 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC4.47□□□□□ -1.69
SDCBPO00560 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SDCBPO00560 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SDCBPO00560 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SDCBPO00560 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.47□□□□□ -1.69
SDCBPO00560 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
SDCBPO00560 FIG4-202ENST00000368941 791 ntTSL 3 BASIC4.47□□□□□ -1.69
SDCBPO00560 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.47□□□□□ -1.69
SDCBPO00560 SNORA16A-201ENST00000384342 137 ntBASIC4.47□□□□□ -1.69
SDCBPO00560 RAB5CP1-201ENST00000395972 580 ntBASIC4.47□□□□□ -1.69
SDCBPO00560 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.47□□□□□ -1.69
SDCBPO00560 AL596448.1-201ENST00000415024 392 ntBASIC4.47□□□□□ -1.69
SDCBPO00560 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.47□□□□□ -1.69
SDCBPO00560 BMS1P17-202ENST00000416720 316 ntBASIC4.47□□□□□ -1.69
SDCBPO00560 AC124944.2-201ENST00000429866 1242 ntBASIC4.47□□□□□ -1.69
SDCBPO00560 RPL23AP19-201ENST00000436229 369 ntBASIC4.47□□□□□ -1.69
SDCBPO00560 AL138899.2-201ENST00000439139 499 ntBASIC4.47□□□□□ -1.69
SDCBPO00560 AC019185.1-201ENST00000442718 389 ntBASIC4.47□□□□□ -1.69
SDCBPO00560 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.47□□□□□ -1.69
SDCBPO00560 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.47□□□□□ -1.69
SDCBPO00560 AL672138.1-201ENST00000450604 1015 ntBASIC4.47□□□□□ -1.69
SDCBPO00560 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.47□□□□□ -1.69
SDCBPO00560 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC4.47□□□□□ -1.69
SDCBPO00560 RN7SL51P-201ENST00000468230 285 ntBASIC4.47□□□□□ -1.69
SDCBPO00560 RPL7P41-201ENST00000485823 957 ntBASIC4.47□□□□□ -1.69
SDCBPO00560 AC023424.1-201ENST00000496058 459 ntBASIC4.47□□□□□ -1.69
SDCBPO00560 RPS24P16-201ENST00000497294 392 ntBASIC4.47□□□□□ -1.69
SDCBPO00560 FTH1P11-201ENST00000517577 551 ntBASIC4.47□□□□□ -1.69
SDCBPO00560 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC4.47□□□□□ -1.69
SDCBPO00560 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.47□□□□□ -1.69
SDCBPO00560 OR8A2P-201ENST00000528631 952 ntBASIC4.47□□□□□ -1.69
SDCBPO00560 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.47□□□□□ -1.69
SDCBPO00560 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SDCBPO00560 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.47□□□□□ -1.69
SDCBPO00560 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC4.47□□□□□ -1.69
SDCBPO00560 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.47□□□□□ -1.69
SDCBPO00560 AC008521.2-201ENST00000591021 259 ntBASIC4.47□□□□□ -1.69
SDCBPO00560 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.47□□□□□ -1.69
SDCBPO00560 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.47□□□□□ -1.69
SDCBPO00560 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SDCBPO00560 AC027243.2-201ENST00000602530 724 ntBASIC4.47□□□□□ -1.69
SDCBPO00560 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.47□□□□□ -1.69
SDCBPO00560 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC4.47□□□□□ -1.69
SDCBPO00560 CU639417.4-201ENST00000623928 207 ntBASIC4.47□□□□□ -1.69
SDCBPO00560 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.47□□□□□ -1.69
SDCBPO00560 MIR1910-201ENST00000636955 80 ntBASIC4.47□□□□□ -1.69
SDCBPO00560 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
SDCBPO00560 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.47□□□□□ -1.69
SDCBPO00560 CASC19-248ENST00000641674 1356 ntBASIC4.47□□□□□ -1.69
SDCBPO00560 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SDCBPO00560 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SDCBPO00560 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SDCBPO00560 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SDCBPO00560 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SDCBPO00560 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SDCBPO00560 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SDCBPO00560 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SDCBPO00560 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms