Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 MED6P1-201ENST00000439659 713 ntBASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 Z95152.1-201ENST00000453556 656 ntBASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 AL035407.2-201ENST00000454090 378 ntBASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 GTF2IP12-201ENST00000456547 356 ntBASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 RN7SL352P-201ENST00000466002 277 ntBASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 AC094085.1-201ENST00000468914 584 ntBASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 AC008945.1-201ENST00000505144 499 ntBASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 AC025458.1-201ENST00000506046 166 ntBASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 SUMO2P5-201ENST00000506790 245 ntBASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 GAPDHP71-201ENST00000511530 1003 ntBASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 MIR4760-201ENST00000585040 80 ntBASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 AC108865.2-201ENST00000606881 432 ntBASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 AL121652.1-201ENST00000608851 448 ntBASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 AL669942.2-201ENST00000620352 697 ntBASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 AC006840.1-201ENST00000623069 542 ntBASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 RBMY1HP-201ENST00000382759 1389 ntBASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
COL4A3BPQ9Y5P4 AC093311.1-201ENST00000506586 2021 ntBASIC6.77□□□□□ -1.32
COL4A3BPQ9Y5P4 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
COL4A3BPQ9Y5P4 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.77□□□□□ -1.32
COL4A3BPQ9Y5P4 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 RMST-202ENST00000541282 2099 ntTSL 2 BASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 RNU105B-201ENST00000364478 208 ntBASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 SNORA62.2-201ENST00000364672 152 ntBASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 RNU6-584P-201ENST00000410350 95 ntBASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 AC245096.1-201ENST00000413104 546 ntBASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 TCEA1P4-201ENST00000415066 844 ntBASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 AC106883.1-201ENST00000418805 562 ntBASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 RPS15AP30-201ENST00000420976 390 ntBASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 FTLP8-201ENST00000446770 267 ntBASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 RPS26P41-201ENST00000450370 284 ntBASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 AC008280.2-201ENST00000455473 307 ntBASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 AL445687.2-201ENST00000458156 728 ntBASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 RPL12P24-201ENST00000474907 486 ntBASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 HMGB1P38-201ENST00000490557 577 ntBASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 AC008429.4-201ENST00000521201 182 ntBASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 TPM3P3-201ENST00000521343 354 ntBASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 HMGB1P1-201ENST00000522557 636 ntBASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 TRIM77BP-201ENST00000524985 1119 ntBASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 AP004609.2-201ENST00000532177 190 ntBASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 AC007956.1-201ENST00000555623 542 ntBASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 AC091057.3-201ENST00000602684 733 ntBASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 AC018754.1-201ENST00000607486 925 ntBASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 AC015982.1-201ENST00000608113 465 ntBASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms