Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 OR2A3P-201ENST00000493774 953 ntBASIC5.75□□□□□ -1.49
RAI2Q9Y5P3 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC5.75□□□□□ -1.49
RAI2Q9Y5P3 AC008953.1-201ENST00000497334 318 ntBASIC5.75□□□□□ -1.49
RAI2Q9Y5P3 AC016550.1-201ENST00000505348 785 ntBASIC5.75□□□□□ -1.49
RAI2Q9Y5P3 RNU6-615P-201ENST00000516065 106 ntBASIC5.75□□□□□ -1.49
RAI2Q9Y5P3 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.75□□□□□ -1.49
RAI2Q9Y5P3 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.75□□□□□ -1.49
RAI2Q9Y5P3 MRPS16P1-201ENST00000523462 412 ntBASIC5.75□□□□□ -1.49
RAI2Q9Y5P3 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.75□□□□□ -1.49
RAI2Q9Y5P3 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.75□□□□□ -1.49
RAI2Q9Y5P3 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.75□□□□□ -1.49
RAI2Q9Y5P3 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.75□□□□□ -1.49
RAI2Q9Y5P3 HSPE1P2-201ENST00000554777 306 ntBASIC5.75□□□□□ -1.49
RAI2Q9Y5P3 HNRNPCP1-201ENST00000556181 766 ntBASIC5.75□□□□□ -1.49
RAI2Q9Y5P3 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RAI2Q9Y5P3 AC090286.3-201ENST00000573133 187 ntBASIC5.75□□□□□ -1.49
RAI2Q9Y5P3 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.75□□□□□ -1.49
RAI2Q9Y5P3 VN1R81P-201ENST00000602085 372 ntBASIC5.75□□□□□ -1.49
RAI2Q9Y5P3 AL390318.1-201ENST00000624564 687 ntBASIC5.75□□□□□ -1.49
RAI2Q9Y5P3 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC5.75□□□□□ -1.49
RAI2Q9Y5P3 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RAI2Q9Y5P3 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
RAI2Q9Y5P3 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RAI2Q9Y5P3 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
RAI2Q9Y5P3 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.75□□□□□ -1.49
RAI2Q9Y5P3 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.75□□□□□ -1.49
RAI2Q9Y5P3 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RAI2Q9Y5P3 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
RAI2Q9Y5P3 AL158152.1-201ENST00000602652 1435 ntBASIC5.74□□□□□ -1.49
RAI2Q9Y5P3 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RAI2Q9Y5P3 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
RAI2Q9Y5P3 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RAI2Q9Y5P3 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
RAI2Q9Y5P3 RNU6-618P-201ENST00000363518 112 ntBASIC5.74□□□□□ -1.49
RAI2Q9Y5P3 RNA5SP30-201ENST00000365552 115 ntBASIC5.74□□□□□ -1.49
RAI2Q9Y5P3 RN7SKP59-201ENST00000410520 314 ntBASIC5.74□□□□□ -1.49
RAI2Q9Y5P3 RPS6P23-201ENST00000413224 722 ntBASIC5.74□□□□□ -1.49
RAI2Q9Y5P3 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.74□□□□□ -1.49
RAI2Q9Y5P3 RNGTTP1-201ENST00000420965 728 ntBASIC5.74□□□□□ -1.49
RAI2Q9Y5P3 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC5.74□□□□□ -1.49
RAI2Q9Y5P3 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.74□□□□□ -1.49
RAI2Q9Y5P3 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.74□□□□□ -1.49
RAI2Q9Y5P3 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.74□□□□□ -1.49
RAI2Q9Y5P3 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
RAI2Q9Y5P3 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.74□□□□□ -1.49
RAI2Q9Y5P3 MTND2P25-201ENST00000449028 610 ntBASIC5.74□□□□□ -1.49
RAI2Q9Y5P3 LRRC37A14P-201ENST00000452297 462 ntBASIC5.74□□□□□ -1.49
RAI2Q9Y5P3 MTND6P32-201ENST00000457611 483 ntBASIC5.74□□□□□ -1.49
RAI2Q9Y5P3 RPS3AP15-201ENST00000483874 781 ntBASIC5.74□□□□□ -1.49
RAI2Q9Y5P3 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.74□□□□□ -1.49
RAI2Q9Y5P3 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RAI2Q9Y5P3 AC109481.1-201ENST00000509173 282 ntBASIC5.74□□□□□ -1.49
RAI2Q9Y5P3 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.74□□□□□ -1.49
RAI2Q9Y5P3 SNORA43.3-201ENST00000517240 103 ntBASIC5.74□□□□□ -1.49
RAI2Q9Y5P3 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.74□□□□□ -1.49
RAI2Q9Y5P3 AC134349.2-201ENST00000535136 910 ntBASIC5.74□□□□□ -1.49
RAI2Q9Y5P3 AC139697.1-201ENST00000548429 745 ntBASIC5.74□□□□□ -1.49
RAI2Q9Y5P3 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.74□□□□□ -1.49
RAI2Q9Y5P3 CR383656.6-201ENST00000550518 394 ntBASIC5.74□□□□□ -1.49
RAI2Q9Y5P3 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.74□□□□□ -1.49
RAI2Q9Y5P3 AGGF1P7-201ENST00000562369 913 ntBASIC5.74□□□□□ -1.49
RAI2Q9Y5P3 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.74□□□□□ -1.49
RAI2Q9Y5P3 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.74□□□□□ -1.49
RAI2Q9Y5P3 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
RAI2Q9Y5P3 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.74□□□□□ -1.49
RAI2Q9Y5P3 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.74□□□□□ -1.49
RAI2Q9Y5P3 AC073111.2-201ENST00000605657 1075 ntBASIC5.74□□□□□ -1.49
RAI2Q9Y5P3 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RAI2Q9Y5P3 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RAI2Q9Y5P3 AC119674.1-220ENST00000641502 1048 ntBASIC5.74□□□□□ -1.49
RAI2Q9Y5P3 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.74□□□□□ -1.49
RAI2Q9Y5P3 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.74□□□□□ -1.49
RAI2Q9Y5P3 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RAI2Q9Y5P3 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
RAI2Q9Y5P3 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RAI2Q9Y5P3 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RAI2Q9Y5P3 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
RAI2Q9Y5P3 AL136520.1-201ENST00000600311 1322 ntBASIC5.74□□□□□ -1.49
RAI2Q9Y5P3 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
RAI2Q9Y5P3 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RAI2Q9Y5P3 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.73□□□□□ -1.49
RAI2Q9Y5P3 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.73□□□□□ -1.49
RAI2Q9Y5P3 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.73□□□□□ -1.49
RAI2Q9Y5P3 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.73□□□□□ -1.49
RAI2Q9Y5P3 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RAI2Q9Y5P3 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RAI2Q9Y5P3 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.73□□□□□ -1.49
RAI2Q9Y5P3 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RAI2Q9Y5P3 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
RAI2Q9Y5P3 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.73□□□□□ -1.49
RAI2Q9Y5P3 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RAI2Q9Y5P3 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RAI2Q9Y5P3 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RAI2Q9Y5P3 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RAI2Q9Y5P3 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RAI2Q9Y5P3 RNU1-136P-201ENST00000384181 164 ntBASIC5.73□□□□□ -1.49
RAI2Q9Y5P3 MIR550A3-201ENST00000390735 95 ntBASIC5.73□□□□□ -1.49
RAI2Q9Y5P3 AL356967.1-201ENST00000406305 431 ntBASIC5.73□□□□□ -1.49
RAI2Q9Y5P3 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.73□□□□□ -1.49
RAI2Q9Y5P3 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms