Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 AC133552.1-201ENST00000569988 4007 ntBASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 MIR551A-201ENST00000385042 96 ntBASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 MIR143-201ENST00000385300 106 ntBASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 U3.28-201ENST00000391249 210 ntBASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 AC240504.1-201ENST00000395709 845 ntBASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 SEPT7P8-201ENST00000413308 775 ntBASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 RAB9AP4-201ENST00000415230 609 ntBASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 PTP4A1P1-201ENST00000420539 515 ntBASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 AC079355.1-201ENST00000421770 223 ntBASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 TNPO1P1-201ENST00000423641 1138 ntBASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 AL121776.1-201ENST00000429337 372 ntBASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 AC239798.3-201ENST00000454459 408 ntBASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 HMGN1P8-201ENST00000463578 288 ntBASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 AC147055.1-201ENST00000509261 750 ntBASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 NRBF2P4-201ENST00000520874 850 ntBASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 AC022784.5-201ENST00000522241 437 ntBASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 OR4A17P-201ENST00000526032 904 ntBASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 AC012616.1-201ENST00000600294 197 ntBASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 CASC19-260ENST00000641828 2001 ntBASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 LINC01963-201ENST00000562038 3148 ntBASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 AC083899.1-201ENST00000454465 3819 ntBASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 AL022322.2-201ENST00000624072 20397 ntBASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
ATG4BQ9Y4P1 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
ATG4BQ9Y4P1 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.21□□□□□ -1.57
ATG4BQ9Y4P1 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.21□□□□□ -1.57
ATG4BQ9Y4P1 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 AC079097.1-201ENST00000512187 1399 ntBASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 SNORA51.1-201ENST00000363243 140 ntBASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 RN7SKP28-201ENST00000364770 305 ntBASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 U3.25-201ENST00000391209 220 ntBASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 AL133482.1-201ENST00000415988 498 ntBASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 AL158827.1-201ENST00000416300 391 ntBASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 BX276092.6-201ENST00000430476 250 ntBASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 UBE2V2P3-201ENST00000433562 437 ntBASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 NDUFB4P8-201ENST00000435351 367 ntBASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 AC073465.2-201ENST00000440938 498 ntBASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 AC092106.1-201ENST00000444291 373 ntBASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 AL157385.1-201ENST00000446973 268 ntBASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 BX276092.8-201ENST00000455722 250 ntBASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 RNU6-775P-201ENST00000459318 96 ntBASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 RN7SL197P-201ENST00000466981 299 ntBASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 RN7SL466P-201ENST00000497546 295 ntBASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 AC021106.1-201ENST00000509020 1058 ntBASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 RNA5SP362-201ENST00000516048 118 ntBASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms