Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 RN7SL37P-201ENST00000490461 307 ntBASIC7.33□□□□□ -1.24
CNTN3Q9P232 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
CNTN3Q9P232 SUMO2P7-201ENST00000511179 285 ntBASIC7.33□□□□□ -1.24
CNTN3Q9P232 AC109471.1-201ENST00000511631 612 ntBASIC7.33□□□□□ -1.24
CNTN3Q9P232 OR5AK3P-201ENST00000527486 1297 ntBASIC7.33□□□□□ -1.24
CNTN3Q9P232 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC7.33□□□□□ -1.24
CNTN3Q9P232 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
CNTN3Q9P232 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC7.33□□□□□ -1.24
CNTN3Q9P232 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC7.33□□□□□ -1.24
CNTN3Q9P232 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC7.33□□□□□ -1.24
CNTN3Q9P232 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC7.33□□□□□ -1.24
CNTN3Q9P232 ZNF519P2-201ENST00000557032 169 ntBASIC7.33□□□□□ -1.24
CNTN3Q9P232 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC7.33□□□□□ -1.24
CNTN3Q9P232 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC7.33□□□□□ -1.24
CNTN3Q9P232 AC092325.1-201ENST00000566449 554 ntBASIC7.33□□□□□ -1.24
CNTN3Q9P232 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CNTN3Q9P232 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC7.33□□□□□ -1.24
CNTN3Q9P232 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC7.33□□□□□ -1.24
CNTN3Q9P232 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC7.33□□□□□ -1.24
CNTN3Q9P232 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC7.33□□□□□ -1.24
CNTN3Q9P232 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC7.33□□□□□ -1.24
CNTN3Q9P232 AL356055.1-201ENST00000602528 446 ntBASIC7.33□□□□□ -1.24
CNTN3Q9P232 AC020765.1-201ENST00000604296 328 ntBASIC7.33□□□□□ -1.24
CNTN3Q9P232 AC091965.4-201ENST00000607691 587 ntBASIC7.33□□□□□ -1.24
CNTN3Q9P232 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
CNTN3Q9P232 CASC22-202ENST00000628396 802 ntTSL 5 BASIC7.33□□□□□ -1.24
CNTN3Q9P232 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC7.33□□□□□ -1.24
CNTN3Q9P232 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CNTN3Q9P232 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
CNTN3Q9P232 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
CNTN3Q9P232 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC7.33□□□□□ -1.24
CNTN3Q9P232 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC7.33□□□□□ -1.24
CNTN3Q9P232 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CNTN3Q9P232 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
CNTN3Q9P232 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
CNTN3Q9P232 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CNTN3Q9P232 AC116158.1-201ENST00000560231 2129 ntBASIC7.33□□□□□ -1.24
CNTN3Q9P232 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC7.33□□□□□ -1.24
CNTN3Q9P232 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC7.33□□□□□ -1.24
CNTN3Q9P232 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC7.33□□□□□ -1.24
CNTN3Q9P232 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC7.33□□□□□ -1.24
CNTN3Q9P232 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC7.33□□□□□ -1.24
CNTN3Q9P232 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC7.32□□□□□ -1.24
CNTN3Q9P232 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CNTN3Q9P232 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC7.32□□□□□ -1.24
CNTN3Q9P232 Z97989.1-201ENST00000531702 2421 ntBASIC7.32□□□□□ -1.24
CNTN3Q9P232 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CNTN3Q9P232 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
CNTN3Q9P232 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CNTN3Q9P232 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CNTN3Q9P232 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CNTN3Q9P232 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC7.32□□□□□ -1.24
CNTN3Q9P232 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC7.32□□□□□ -1.24
CNTN3Q9P232 NPL-212ENST00000614468 2376 ntTSL 5 BASIC7.32□□□□□ -1.24
CNTN3Q9P232 YES1-203ENST00000577961 4554 ntTSL 5 BASIC7.32□□□□□ -1.24
CNTN3Q9P232 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC7.32□□□□□ -1.24
CNTN3Q9P232 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CNTN3Q9P232 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CNTN3Q9P232 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CNTN3Q9P232 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC7.32□□□□□ -1.24
CNTN3Q9P232 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CNTN3Q9P232 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CNTN3Q9P232 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC7.32□□□□□ -1.24
CNTN3Q9P232 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
CNTN3Q9P232 SNORA7A-201ENST00000384765 139 ntBASIC7.32□□□□□ -1.24
CNTN3Q9P232 MIR640-201ENST00000385086 96 ntBASIC7.32□□□□□ -1.24
CNTN3Q9P232 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CNTN3Q9P232 CAV1-204ENST00000393470 598 ntTSL 4 BASIC7.32□□□□□ -1.24
CNTN3Q9P232 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC7.32□□□□□ -1.24
CNTN3Q9P232 NRBF2P2-201ENST00000413087 861 ntBASIC7.32□□□□□ -1.24
CNTN3Q9P232 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC7.32□□□□□ -1.24
CNTN3Q9P232 OFD1P2Y-201ENST00000421895 1149 ntBASIC7.32□□□□□ -1.24
CNTN3Q9P232 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC7.32□□□□□ -1.24
CNTN3Q9P232 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC7.32□□□□□ -1.24
CNTN3Q9P232 AC241584.1-201ENST00000438469 1241 ntBASIC7.32□□□□□ -1.24
CNTN3Q9P232 TRIM60P18-201ENST00000441518 828 ntBASIC7.32□□□□□ -1.24
CNTN3Q9P232 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC7.32□□□□□ -1.24
CNTN3Q9P232 WASF1P1-201ENST00000447560 1131 ntBASIC7.32□□□□□ -1.24
CNTN3Q9P232 AL445991.1-201ENST00000450381 475 ntBASIC7.32□□□□□ -1.24
CNTN3Q9P232 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC7.32□□□□□ -1.24
CNTN3Q9P232 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC7.32□□□□□ -1.24
CNTN3Q9P232 TPT1P7-201ENST00000458300 517 ntBASIC7.32□□□□□ -1.24
CNTN3Q9P232 XACT-201ENST00000468762 497 ntTSL 5 BASIC7.32□□□□□ -1.24
CNTN3Q9P232 OR11I1P-201ENST00000486033 954 ntBASIC7.32□□□□□ -1.24
CNTN3Q9P232 PDCL3P4-201ENST00000489621 720 ntBASIC7.32□□□□□ -1.24
CNTN3Q9P232 AC090071.1-201ENST00000507713 644 ntBASIC7.32□□□□□ -1.24
CNTN3Q9P232 AC116347.2-201ENST00000514912 523 ntBASIC7.32□□□□□ -1.24
CNTN3Q9P232 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC7.32□□□□□ -1.24
CNTN3Q9P232 AC023632.1-201ENST00000518463 375 ntBASIC7.32□□□□□ -1.24
CNTN3Q9P232 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
CNTN3Q9P232 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC7.32□□□□□ -1.24
CNTN3Q9P232 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC7.32□□□□□ -1.24
CNTN3Q9P232 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC7.32□□□□□ -1.24
CNTN3Q9P232 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC7.32□□□□□ -1.24
CNTN3Q9P232 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CNTN3Q9P232 ADI1P3-201ENST00000549509 470 ntBASIC7.32□□□□□ -1.24
CNTN3Q9P232 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC7.32□□□□□ -1.24
CNTN3Q9P232 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC7.32□□□□□ -1.24
CNTN3Q9P232 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC7.32□□□□□ -1.24
CNTN3Q9P232 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms