Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 SNORA63.3-201ENST00000362682 132 ntBASIC6.94□□□□□ -1.3
RTFDC1Q9BY42 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
RTFDC1Q9BY42 MIR550A3-201ENST00000390735 95 ntBASIC6.94□□□□□ -1.3
RTFDC1Q9BY42 RNA5SP105-201ENST00000391123 113 ntBASIC6.94□□□□□ -1.3
RTFDC1Q9BY42 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.94□□□□□ -1.3
RTFDC1Q9BY42 RNU4-64P-201ENST00000410795 131 ntBASIC6.94□□□□□ -1.3
RTFDC1Q9BY42 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC6.94□□□□□ -1.3
RTFDC1Q9BY42 MTND2P9-201ENST00000422293 931 ntBASIC6.94□□□□□ -1.3
RTFDC1Q9BY42 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.94□□□□□ -1.3
RTFDC1Q9BY42 AL590762.4-201ENST00000425885 253 ntBASIC6.94□□□□□ -1.3
RTFDC1Q9BY42 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC6.94□□□□□ -1.3
RTFDC1Q9BY42 PSMD10P3-201ENST00000437000 448 ntBASIC6.94□□□□□ -1.3
RTFDC1Q9BY42 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC6.94□□□□□ -1.3
RTFDC1Q9BY42 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC6.94□□□□□ -1.3
RTFDC1Q9BY42 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC6.94□□□□□ -1.3
RTFDC1Q9BY42 FAR2P1-206ENST00000449736 709 ntBASIC6.94□□□□□ -1.3
RTFDC1Q9BY42 NPM1P17-201ENST00000479221 602 ntBASIC6.94□□□□□ -1.3
RTFDC1Q9BY42 RPSAP50-201ENST00000481955 852 ntBASIC6.94□□□□□ -1.3
RTFDC1Q9BY42 AC021087.2-201ENST00000504656 1203 ntBASIC6.94□□□□□ -1.3
RTFDC1Q9BY42 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
RTFDC1Q9BY42 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC6.94□□□□□ -1.3
RTFDC1Q9BY42 MTATP6P9-201ENST00000515039 680 ntBASIC6.94□□□□□ -1.3
RTFDC1Q9BY42 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC6.94□□□□□ -1.3
RTFDC1Q9BY42 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.94□□□□□ -1.3
RTFDC1Q9BY42 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC6.94□□□□□ -1.3
RTFDC1Q9BY42 AL049779.3-201ENST00000557141 606 ntBASIC6.94□□□□□ -1.3
RTFDC1Q9BY42 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC6.94□□□□□ -1.3
RTFDC1Q9BY42 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
RTFDC1Q9BY42 AC000068.2-201ENST00000608816 460 ntBASIC6.94□□□□□ -1.3
RTFDC1Q9BY42 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.94□□□□□ -1.3
RTFDC1Q9BY42 AL118522.2-201ENST00000616045 615 ntBASIC6.94□□□□□ -1.3
RTFDC1Q9BY42 AC018926.1-201ENST00000616335 435 ntBASIC6.94□□□□□ -1.3
RTFDC1Q9BY42 AC241377.1-201ENST00000619797 406 ntBASIC6.94□□□□□ -1.3
RTFDC1Q9BY42 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC6.94□□□□□ -1.3
RTFDC1Q9BY42 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
RTFDC1Q9BY42 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
RTFDC1Q9BY42 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.94□□□□□ -1.3
RTFDC1Q9BY42 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
RTFDC1Q9BY42 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
RTFDC1Q9BY42 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.94□□□□□ -1.3
RTFDC1Q9BY42 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.94□□□□□ -1.3
RTFDC1Q9BY42 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.94□□□□□ -1.3
RTFDC1Q9BY42 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
RTFDC1Q9BY42 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
RTFDC1Q9BY42 MTND5P23-201ENST00000430812 1655 ntBASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 U3.2-201ENST00000362981 210 ntBASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 GCNT6-201ENST00000379591 934 ntBASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 RNU1-77P-201ENST00000390868 162 ntBASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 AC013410.2-201ENST00000422627 201 ntBASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 HSFY1P1-201ENST00000423928 1178 ntBASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 CYCSP6-201ENST00000434498 302 ntBASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 VN1R54P-201ENST00000435210 1049 ntBASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 H2AFZP6-201ENST00000444403 394 ntBASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 AL645937.3-201ENST00000453647 936 ntBASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 AC092902.1-201ENST00000486999 259 ntBASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 OR5D15P-201ENST00000531671 942 ntBASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 C1GALT1P1-201ENST00000548895 1089 ntBASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 NOP56P3-201ENST00000549457 385 ntBASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 AC104072.1-201ENST00000568817 668 ntBASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 AL359715.3-201ENST00000569267 2123 ntBASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 MTCO3P22-201ENST00000603219 784 ntBASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 MTCO2P22-201ENST00000603246 681 ntBASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 AL391834.1-201ENST00000609609 560 ntBASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 MIR1264-201ENST00000616374 69 ntBASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 AC022306.3-201ENST00000619930 550 ntBASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 FBXL21-201ENST00000297158 1305 ntBASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 MTND4P9-201ENST00000507819 1346 ntBASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
RTFDC1Q9BY42 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms