Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.91□□□□□ -1.62
RSPO3Q9BXY4 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.91□□□□□ -1.62
RSPO3Q9BXY4 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.91□□□□□ -1.62
RSPO3Q9BXY4 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
RSPO3Q9BXY4 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC4.91□□□□□ -1.62
RSPO3Q9BXY4 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.91□□□□□ -1.62
RSPO3Q9BXY4 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RSPO3Q9BXY4 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.91□□□□□ -1.62
RSPO3Q9BXY4 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RSPO3Q9BXY4 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RSPO3Q9BXY4 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC4.91□□□□□ -1.62
RSPO3Q9BXY4 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RSPO3Q9BXY4 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.9□□□□□ -1.62
RSPO3Q9BXY4 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.9□□□□□ -1.62
RSPO3Q9BXY4 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
RSPO3Q9BXY4 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
RSPO3Q9BXY4 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
RSPO3Q9BXY4 AC114947.2-201ENST00000565748 2125 ntBASIC4.9□□□□□ -1.62
RSPO3Q9BXY4 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.9□□□□□ -1.62
RSPO3Q9BXY4 AC007618.1-201ENST00000366455 732 ntBASIC4.9□□□□□ -1.63
RSPO3Q9BXY4 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RSPO3Q9BXY4 SNORA48.4-201ENST00000391089 134 ntBASIC4.9□□□□□ -1.63
RSPO3Q9BXY4 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.9□□□□□ -1.63
RSPO3Q9BXY4 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.9□□□□□ -1.63
RSPO3Q9BXY4 PPP2R2DP1-201ENST00000420526 637 ntBASIC4.9□□□□□ -1.63
RSPO3Q9BXY4 RPL12P17-201ENST00000432393 498 ntBASIC4.9□□□□□ -1.63
RSPO3Q9BXY4 SERPINA7P1-201ENST00000443077 631 ntBASIC4.9□□□□□ -1.63
RSPO3Q9BXY4 AL161636.2-201ENST00000445179 927 ntBASIC4.9□□□□□ -1.63
RSPO3Q9BXY4 AC073909.1-201ENST00000447112 999 ntBASIC4.9□□□□□ -1.63
RSPO3Q9BXY4 AC105399.1-202ENST00000447303 205 ntBASIC4.9□□□□□ -1.63
RSPO3Q9BXY4 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.9□□□□□ -1.63
RSPO3Q9BXY4 AP000797.2-201ENST00000475768 606 ntBASIC4.9□□□□□ -1.63
RSPO3Q9BXY4 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RSPO3Q9BXY4 AC090638.1-201ENST00000498296 909 ntBASIC4.9□□□□□ -1.63
RSPO3Q9BXY4 AC008638.1-201ENST00000506035 866 ntBASIC4.9□□□□□ -1.63
RSPO3Q9BXY4 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.9□□□□□ -1.63
RSPO3Q9BXY4 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.9□□□□□ -1.63
RSPO3Q9BXY4 AC100784.1-201ENST00000522790 310 ntBASIC4.9□□□□□ -1.63
RSPO3Q9BXY4 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.9□□□□□ -1.63
RSPO3Q9BXY4 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.9□□□□□ -1.63
RSPO3Q9BXY4 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.9□□□□□ -1.63
RSPO3Q9BXY4 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.9□□□□□ -1.63
RSPO3Q9BXY4 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.9□□□□□ -1.63
RSPO3Q9BXY4 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.9□□□□□ -1.63
RSPO3Q9BXY4 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.9□□□□□ -1.63
RSPO3Q9BXY4 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.9□□□□□ -1.63
RSPO3Q9BXY4 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.9□□□□□ -1.63
RSPO3Q9BXY4 AC005005.4-201ENST00000623789 16698 ntBASIC4.9□□□□□ -1.63
RSPO3Q9BXY4 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RSPO3Q9BXY4 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RSPO3Q9BXY4 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RSPO3Q9BXY4 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RSPO3Q9BXY4 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RSPO3Q9BXY4 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
RSPO3Q9BXY4 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
RSPO3Q9BXY4 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RSPO3Q9BXY4 PCAT14-202ENST00000627127 3935 ntBASIC4.9□□□□□ -1.63
RSPO3Q9BXY4 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RSPO3Q9BXY4 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
RSPO3Q9BXY4 SMG1P7-201ENST00000565246 2704 ntBASIC4.89□□□□□ -1.63
RSPO3Q9BXY4 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
RSPO3Q9BXY4 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RSPO3Q9BXY4 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RSPO3Q9BXY4 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
RSPO3Q9BXY4 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RSPO3Q9BXY4 OR9K1P-202ENST00000641111 3217 ntBASIC4.89□□□□□ -1.63
RSPO3Q9BXY4 U3.7-201ENST00000363668 216 ntBASIC4.89□□□□□ -1.63
RSPO3Q9BXY4 RNA5SP335-201ENST00000363817 110 ntBASIC4.89□□□□□ -1.63
RSPO3Q9BXY4 MIR589-201ENST00000385238 99 ntBASIC4.89□□□□□ -1.63
RSPO3Q9BXY4 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RSPO3Q9BXY4 MGAT2P2-201ENST00000427194 797 ntBASIC4.89□□□□□ -1.63
RSPO3Q9BXY4 VTI1BP4-201ENST00000427516 527 ntBASIC4.89□□□□□ -1.63
RSPO3Q9BXY4 AL121776.1-201ENST00000429337 372 ntBASIC4.89□□□□□ -1.63
RSPO3Q9BXY4 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC4.89□□□□□ -1.63
RSPO3Q9BXY4 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.89□□□□□ -1.63
RSPO3Q9BXY4 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.89□□□□□ -1.63
RSPO3Q9BXY4 HMGN1P36-201ENST00000446623 298 ntBASIC4.89□□□□□ -1.63
RSPO3Q9BXY4 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RSPO3Q9BXY4 AL157385.1-201ENST00000446973 268 ntBASIC4.89□□□□□ -1.63
RSPO3Q9BXY4 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.89□□□□□ -1.63
RSPO3Q9BXY4 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.89□□□□□ -1.63
RSPO3Q9BXY4 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.89□□□□□ -1.63
RSPO3Q9BXY4 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.89□□□□□ -1.63
RSPO3Q9BXY4 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.89□□□□□ -1.63
RSPO3Q9BXY4 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.89□□□□□ -1.63
RSPO3Q9BXY4 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC4.89□□□□□ -1.63
RSPO3Q9BXY4 YWHABP2-201ENST00000540201 713 ntBASIC4.89□□□□□ -1.63
RSPO3Q9BXY4 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.89□□□□□ -1.63
RSPO3Q9BXY4 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.89□□□□□ -1.63
RSPO3Q9BXY4 AC051619.2-201ENST00000559063 397 ntBASIC4.89□□□□□ -1.63
RSPO3Q9BXY4 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC4.89□□□□□ -1.63
RSPO3Q9BXY4 AC010487.1-201ENST00000594408 1172 ntBASIC4.89□□□□□ -1.63
RSPO3Q9BXY4 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.89□□□□□ -1.63
RSPO3Q9BXY4 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC4.89□□□□□ -1.63
RSPO3Q9BXY4 AC008814.1-201ENST00000603797 406 ntBASIC4.89□□□□□ -1.63
RSPO3Q9BXY4 AC022467.1-201ENST00000614738 749 ntBASIC4.89□□□□□ -1.63
RSPO3Q9BXY4 REV3L-214ENST00000619481 969 ntTSL 5 BASIC4.89□□□□□ -1.63
RSPO3Q9BXY4 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
RSPO3Q9BXY4 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC4.89□□□□□ -1.63
RSPO3Q9BXY4 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms