Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC7.57□□□□□ -1.2
SIN3AQ96ST3 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC7.57□□□□□ -1.2
SIN3AQ96ST3 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC7.57□□□□□ -1.2
SIN3AQ96ST3 AL389915.2-201ENST00000454576 441 ntBASIC7.57□□□□□ -1.2
SIN3AQ96ST3 AC079168.1-201ENST00000458741 345 ntBASIC7.57□□□□□ -1.2
SIN3AQ96ST3 RN7SL515P-201ENST00000463999 297 ntBASIC7.57□□□□□ -1.2
SIN3AQ96ST3 RPL7P39-201ENST00000481157 744 ntBASIC7.57□□□□□ -1.2
SIN3AQ96ST3 RPS4XP14-201ENST00000493072 781 ntBASIC7.57□□□□□ -1.2
SIN3AQ96ST3 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC7.57□□□□□ -1.2
SIN3AQ96ST3 SCARNA21.2-201ENST00000516600 166 ntBASIC7.57□□□□□ -1.2
SIN3AQ96ST3 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC7.57□□□□□ -1.2
SIN3AQ96ST3 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC7.57□□□□□ -1.2
SIN3AQ96ST3 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC7.57□□□□□ -1.2
SIN3AQ96ST3 MIR3691-201ENST00000578066 90 ntBASIC7.57□□□□□ -1.2
SIN3AQ96ST3 RN7SL708P-201ENST00000580952 299 ntBASIC7.57□□□□□ -1.2
SIN3AQ96ST3 AP005131.7-201ENST00000610087 611 ntBASIC7.57□□□□□ -1.2
SIN3AQ96ST3 AC015660.5-201ENST00000623238 564 ntBASIC7.57□□□□□ -1.2
SIN3AQ96ST3 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SIN3AQ96ST3 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SIN3AQ96ST3 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
SIN3AQ96ST3 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC7.57□□□□□ -1.2
SIN3AQ96ST3 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC7.57□□□□□ -1.2
SIN3AQ96ST3 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC7.57□□□□□ -1.2
SIN3AQ96ST3 AL450345.1-202ENST00000605741 3881 ntBASIC7.57□□□□□ -1.2
SIN3AQ96ST3 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SIN3AQ96ST3 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC7.57□□□□□ -1.2
SIN3AQ96ST3 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SIN3AQ96ST3 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SIN3AQ96ST3 AC023421.1-201ENST00000590535 1785 ntBASIC7.56□□□□□ -1.2
SIN3AQ96ST3 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SIN3AQ96ST3 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
SIN3AQ96ST3 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
SIN3AQ96ST3 U3.7-201ENST00000363668 216 ntBASIC7.56□□□□□ -1.2
SIN3AQ96ST3 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SIN3AQ96ST3 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC7.56□□□□□ -1.2
SIN3AQ96ST3 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC7.56□□□□□ -1.2
SIN3AQ96ST3 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC7.56□□□□□ -1.2
SIN3AQ96ST3 AC074386.1-201ENST00000476560 767 ntBASIC7.56□□□□□ -1.2
SIN3AQ96ST3 RPS18P6-201ENST00000476880 458 ntBASIC7.56□□□□□ -1.2
SIN3AQ96ST3 AC105420.1-201ENST00000504389 582 ntBASIC7.56□□□□□ -1.2
SIN3AQ96ST3 RPSAP73-201ENST00000614820 330 ntBASIC7.56□□□□□ -1.2
SIN3AQ96ST3 AC016769.4-201ENST00000616893 535 ntBASIC7.56□□□□□ -1.2
SIN3AQ96ST3 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC7.56□□□□□ -1.2
SIN3AQ96ST3 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SIN3AQ96ST3 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
SIN3AQ96ST3 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
SIN3AQ96ST3 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SIN3AQ96ST3 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC7.55□□□□□ -1.2
SIN3AQ96ST3 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SIN3AQ96ST3 FHIT-201ENST00000341848 174 ntTSL 3 BASIC7.55□□□□□ -1.2
SIN3AQ96ST3 U8.4-201ENST00000363626 134 ntBASIC7.55□□□□□ -1.2
SIN3AQ96ST3 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
SIN3AQ96ST3 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC7.55□□□□□ -1.2
SIN3AQ96ST3 MIR600-201ENST00000385007 98 ntBASIC7.55□□□□□ -1.2
SIN3AQ96ST3 MIR223-201ENST00000385204 110 ntBASIC7.55□□□□□ -1.2
SIN3AQ96ST3 BX323845.1-201ENST00000432417 179 ntBASIC7.55□□□□□ -1.2
SIN3AQ96ST3 RHOT1P3-201ENST00000436571 331 ntBASIC7.55□□□□□ -1.2
SIN3AQ96ST3 AC020779.1-201ENST00000478757 796 ntBASIC7.55□□□□□ -1.2
SIN3AQ96ST3 AC004815.1-201ENST00000484185 331 ntBASIC7.55□□□□□ -1.2
SIN3AQ96ST3 AC093763.2-201ENST00000505334 1223 ntBASIC7.55□□□□□ -1.2
SIN3AQ96ST3 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SIN3AQ96ST3 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC7.55□□□□□ -1.2
SIN3AQ96ST3 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
SIN3AQ96ST3 NPM1P5-201ENST00000557228 838 ntBASIC7.55□□□□□ -1.2
SIN3AQ96ST3 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC7.55□□□□□ -1.2
SIN3AQ96ST3 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC7.55□□□□□ -1.2
SIN3AQ96ST3 AL049840.6-202ENST00000603373 279 ntBASIC7.55□□□□□ -1.2
SIN3AQ96ST3 AL445222.1-201ENST00000607259 628 ntBASIC7.55□□□□□ -1.2
SIN3AQ96ST3 AL031658.2-201ENST00000616850 651 ntBASIC7.55□□□□□ -1.2
SIN3AQ96ST3 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC7.55□□□□□ -1.2
SIN3AQ96ST3 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC7.55□□□□□ -1.2
SIN3AQ96ST3 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SIN3AQ96ST3 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC7.55□□□□□ -1.2
SIN3AQ96ST3 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
SIN3AQ96ST3 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
SIN3AQ96ST3 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC7.55□□□□□ -1.2
SIN3AQ96ST3 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SIN3AQ96ST3 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SIN3AQ96ST3 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC7.54□□□□□ -1.2
SIN3AQ96ST3 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC7.54□□□□□ -1.2
SIN3AQ96ST3 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC7.54□□□□□ -1.2
SIN3AQ96ST3 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
SIN3AQ96ST3 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
SIN3AQ96ST3 AC006210.2-201ENST00000367074 1545 ntBASIC7.54□□□□□ -1.2
SIN3AQ96ST3 AC004817.4-201ENST00000602396 3625 ntBASIC7.54□□□□□ -1.2
SIN3AQ96ST3 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SIN3AQ96ST3 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SIN3AQ96ST3 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
SIN3AQ96ST3 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
SIN3AQ96ST3 Z68694.1-201ENST00000413929 841 ntBASIC7.54□□□□□ -1.2
SIN3AQ96ST3 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC7.54□□□□□ -1.2
SIN3AQ96ST3 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC7.54□□□□□ -1.2
SIN3AQ96ST3 NPM1P19-201ENST00000450070 712 ntBASIC7.54□□□□□ -1.2
SIN3AQ96ST3 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC7.54□□□□□ -1.2
SIN3AQ96ST3 RN7SL189P-201ENST00000468631 289 ntBASIC7.54□□□□□ -1.2
SIN3AQ96ST3 AC090114.3-201ENST00000479267 829 ntBASIC7.54□□□□□ -1.2
SIN3AQ96ST3 RN7SL808P-201ENST00000496066 299 ntBASIC7.54□□□□□ -1.2
SIN3AQ96ST3 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC7.54□□□□□ -1.2
SIN3AQ96ST3 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC7.54□□□□□ -1.2
SIN3AQ96ST3 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC7.54□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms