Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 FAM27E4-201ENST00000605259 342 ntBASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 AC145423.1-201ENST00000605712 336 ntBASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 MIR6793-201ENST00000612376 63 ntBASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 AC018926.1-201ENST00000616335 435 ntBASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 UOX-205ENST00000640983 544 ntTSL 4 BASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 AC020633.1-201ENST00000468439 2247 ntBASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 AC093671.1-201ENST00000624981 2929 ntBASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 AC018809.2-201ENST00000602436 3823 ntBASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 DDX18P6-201ENST00000450119 1997 ntBASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 SELENOWP1-201ENST00000322792 252 ntBASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 ATP5F1P6-201ENST00000402768 767 ntBASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 METTL15P3-201ENST00000415522 1221 ntBASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 BTF3P9-201ENST00000418784 283 ntBASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 AC092570.3-201ENST00000420113 693 ntBASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 BX284632.2-201ENST00000421091 399 ntBASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 ARL2BPP3-201ENST00000421226 480 ntBASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 AC092651.1-201ENST00000426110 312 ntBASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 CRIP1P1-201ENST00000427567 185 ntBASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 AL512605.1-202ENST00000441919 381 ntBASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 AL359955.2-201ENST00000445380 353 ntBASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 MOB1AP2-201ENST00000446060 614 ntBASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 AC119751.4-201ENST00000507498 357 ntBASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 AC010374.2-201ENST00000512933 535 ntBASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 AC112191.2-201ENST00000522428 333 ntBASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 AC060780.2-201ENST00000589047 198 ntBASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 AC097504.2-201ENST00000608088 454 ntBASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 AC103703.1-201ENST00000634783 663 ntBASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 AP001153.1-201ENST00000641024 338 ntBASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
CHMP4CQ96CF2 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
CHMP4CQ96CF2 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.29
CHMP4CQ96CF2 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
CHMP4CQ96CF2 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
CHMP4CQ96CF2 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.96□□□□□ -1.29
CHMP4CQ96CF2 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
CHMP4CQ96CF2 AL121839.2-201ENST00000565058 6943 ntBASIC6.96□□□□□ -1.3
CHMP4CQ96CF2 AC010266.2-201ENST00000564741 3255 ntBASIC6.96□□□□□ -1.3
CHMP4CQ96CF2 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CHMP4CQ96CF2 KARSP1-201ENST00000451871 1752 ntBASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms