Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AC069306.1-201ENST00000507006 843 ntBASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 AC106800.3-201ENST00000511389 308 ntBASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 AC097486.1-201ENST00000515331 210 ntBASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 AC010376.1-201ENST00000522101 334 ntBASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 AP005639.1-201ENST00000526939 192 ntBASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 AC009120.3-201ENST00000563335 499 ntBASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 MIR3189-201ENST00000578735 73 ntBASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 CBX3P2-202ENST00000583365 535 ntBASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 AC027229.1-201ENST00000583887 253 ntBASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 AC011891.2-201ENST00000604949 397 ntBASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 AC087752.4-201ENST00000605911 462 ntBASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 AC012676.3-201ENST00000614983 479 ntBASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 AC021755.4-201ENST00000616620 456 ntBASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 RNA5SP439-201ENST00000617595 124 ntBASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 OR7E91P-202ENST00000642062 1198 ntBASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 TCP1P3-201ENST00000414406 1498 ntBASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 MTCO1P7-201ENST00000419523 1542 ntBASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 CD2-201ENST00000369477 478 ntTSL 2 BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 HMGB1P10-201ENST00000395823 563 ntBASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 ATP5F1P2-201ENST00000398143 760 ntBASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 PEX12P1-201ENST00000400284 1048 ntBASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 USP9YP21-201ENST00000420603 432 ntBASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 AC112492.2-201ENST00000432774 1030 ntBASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 MTND1P34-201ENST00000438556 671 ntBASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 CXCR2P1-202ENST00000443392 1074 ntBASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 RPS27AP3-201ENST00000453803 454 ntBASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 AL133351.3-201ENST00000454998 193 ntBASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 AC104339.1-201ENST00000465478 348 ntBASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 AC008410.1-201ENST00000483777 339 ntBASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 AC114728.1-201ENST00000488289 483 ntBASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 AC010486.3-201ENST00000511602 785 ntBASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 RNU5A-7P-201ENST00000515979 116 ntBASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 SNORA70.11-201ENST00000515987 138 ntBASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 SNORA70.13-201ENST00000516116 138 ntBASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms