Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AC005520.3-201ENST00000602874 370 ntBASIC5.36□□□□□ -1.55
NUP54Q7Z3B4 MTCO2P22-201ENST00000603246 681 ntBASIC5.36□□□□□ -1.55
NUP54Q7Z3B4 AC015802.5-201ENST00000607478 399 ntBASIC5.36□□□□□ -1.55
NUP54Q7Z3B4 AP005131.7-201ENST00000610087 611 ntBASIC5.36□□□□□ -1.55
NUP54Q7Z3B4 AL162574.2-201ENST00000614618 657 ntBASIC5.36□□□□□ -1.55
NUP54Q7Z3B4 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.36□□□□□ -1.55
NUP54Q7Z3B4 OR11H2-202ENST00000641517 1085 ntBASIC5.36□□□□□ -1.55
NUP54Q7Z3B4 AC117409.1-201ENST00000470499 1310 ntBASIC5.36□□□□□ -1.55
NUP54Q7Z3B4 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NUP54Q7Z3B4 NEPNP-201ENST00000404786 1371 ntBASIC5.36□□□□□ -1.55
NUP54Q7Z3B4 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NUP54Q7Z3B4 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NUP54Q7Z3B4 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.36□□□□□ -1.55
NUP54Q7Z3B4 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NUP54Q7Z3B4 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.36□□□□□ -1.55
NUP54Q7Z3B4 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.36□□□□□ -1.55
NUP54Q7Z3B4 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
NUP54Q7Z3B4 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.36□□□□□ -1.55
NUP54Q7Z3B4 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NUP54Q7Z3B4 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NUP54Q7Z3B4 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
NUP54Q7Z3B4 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
NUP54Q7Z3B4 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.36□□□□□ -1.55
NUP54Q7Z3B4 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 NLRP3P1-201ENST00000622303 1785 ntBASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 AC106872.5-201ENST00000508856 1416 ntBASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 RNU6-178P-201ENST00000384631 104 ntBASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 LYPLA1P3-201ENST00000402650 695 ntBASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 AL589655.1-201ENST00000405398 482 ntBASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 NCSTNP1-201ENST00000406229 144 ntBASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 AL034374.1-201ENST00000406329 351 ntBASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 AL358178.1-201ENST00000407698 397 ntBASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 GABARAPL3-201ENST00000412799 354 ntBASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 AC245060.4-201ENST00000413293 1121 ntBASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 EEF1B2P8-201ENST00000414101 671 ntBASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 MRPL53P1-201ENST00000414323 319 ntBASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 METTL15P3-201ENST00000415522 1221 ntBASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 NENFP1-201ENST00000419476 466 ntBASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 OR5M12P-201ENST00000423388 929 ntBASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 AC017019.1-201ENST00000426129 261 ntBASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 VN1R21P-201ENST00000426703 765 ntBASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 CRIP1P1-201ENST00000427567 185 ntBASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 AC079807.1-201ENST00000429993 481 ntBASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 AC046176.1-201ENST00000435260 1170 ntBASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 TXNP2-201ENST00000443918 295 ntBASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 CASP3P1-201ENST00000446037 609 ntBASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 AL445665.1-202ENST00000452436 324 ntBASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 AC089999.1-201ENST00000460336 374 ntBASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 AL157777.1-201ENST00000468100 304 ntBASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 RPS17P15-201ENST00000475609 349 ntBASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 ST13P12-201ENST00000508958 1094 ntBASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 AP004609.2-201ENST00000532177 190 ntBASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 HMGB1P51-201ENST00000605166 638 ntBASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
NUP54Q7Z3B4 BX005019.1-201ENST00000561881 1810 ntBASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 AC109446.4-201ENST00000623235 2755 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms