Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 RN7SKP104-201ENST00000362605 328 ntBASIC6.29□□□□□ -1.4
SHROOM1Q2M3G4 U3.10-201ENST00000364459 214 ntBASIC6.29□□□□□ -1.4
SHROOM1Q2M3G4 RN7SKP186-201ENST00000365371 303 ntBASIC6.29□□□□□ -1.4
SHROOM1Q2M3G4 AL050305.1-201ENST00000399993 1230 ntBASIC6.29□□□□□ -1.4
SHROOM1Q2M3G4 AL645733.1-201ENST00000402250 217 ntBASIC6.29□□□□□ -1.4
SHROOM1Q2M3G4 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.29□□□□□ -1.4
SHROOM1Q2M3G4 RNU6ATAC7P-201ENST00000408111 127 ntBASIC6.29□□□□□ -1.4
SHROOM1Q2M3G4 RN7SKP216-201ENST00000411050 312 ntBASIC6.29□□□□□ -1.4
SHROOM1Q2M3G4 Y_RNA.625-201ENST00000411256 107 ntBASIC6.29□□□□□ -1.4
SHROOM1Q2M3G4 RNF10P1-201ENST00000418589 369 ntBASIC6.29□□□□□ -1.4
SHROOM1Q2M3G4 RBMY2QP-201ENST00000429799 1147 ntBASIC6.29□□□□□ -1.4
SHROOM1Q2M3G4 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC6.29□□□□□ -1.4
SHROOM1Q2M3G4 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC6.29□□□□□ -1.4
SHROOM1Q2M3G4 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC6.29□□□□□ -1.4
SHROOM1Q2M3G4 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC6.29□□□□□ -1.4
SHROOM1Q2M3G4 RHOT1P3-201ENST00000436571 331 ntBASIC6.29□□□□□ -1.4
SHROOM1Q2M3G4 AL390879.1-201ENST00000439143 386 ntBASIC6.29□□□□□ -1.4
SHROOM1Q2M3G4 AL136455.1-201ENST00000441083 1240 ntBASIC6.29□□□□□ -1.4
SHROOM1Q2M3G4 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC6.29□□□□□ -1.4
SHROOM1Q2M3G4 AC092754.1-201ENST00000472975 479 ntBASIC6.29□□□□□ -1.4
SHROOM1Q2M3G4 ST13P12-201ENST00000508958 1094 ntBASIC6.29□□□□□ -1.4
SHROOM1Q2M3G4 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.29□□□□□ -1.4
SHROOM1Q2M3G4 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.29□□□□□ -1.4
SHROOM1Q2M3G4 YWHABP2-201ENST00000540201 713 ntBASIC6.29□□□□□ -1.4
SHROOM1Q2M3G4 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC6.29□□□□□ -1.4
SHROOM1Q2M3G4 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC6.29□□□□□ -1.4
SHROOM1Q2M3G4 H3F3BP2-201ENST00000583907 357 ntBASIC6.29□□□□□ -1.4
SHROOM1Q2M3G4 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC6.29□□□□□ -1.4
SHROOM1Q2M3G4 WBP1LP8-201ENST00000617401 327 ntBASIC6.29□□□□□ -1.4
SHROOM1Q2M3G4 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
SHROOM1Q2M3G4 AC073869.8-201ENST00000641806 335 ntBASIC6.29□□□□□ -1.4
SHROOM1Q2M3G4 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
SHROOM1Q2M3G4 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SHROOM1Q2M3G4 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SHROOM1Q2M3G4 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SHROOM1Q2M3G4 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
SHROOM1Q2M3G4 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.29□□□□□ -1.4
SHROOM1Q2M3G4 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SHROOM1Q2M3G4 AC131971.1-201ENST00000332881 1482 ntBASIC6.28□□□□□ -1.4
SHROOM1Q2M3G4 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
SHROOM1Q2M3G4 AC138907.8-201ENST00000623981 2256 ntBASIC6.28□□□□□ -1.4
SHROOM1Q2M3G4 AC114947.2-201ENST00000565748 2125 ntBASIC6.28□□□□□ -1.4
SHROOM1Q2M3G4 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SHROOM1Q2M3G4 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
SHROOM1Q2M3G4 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
SHROOM1Q2M3G4 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SHROOM1Q2M3G4 DBIP1-201ENST00000401435 260 ntBASIC6.28□□□□□ -1.4
SHROOM1Q2M3G4 RPL23AP18-201ENST00000416139 468 ntBASIC6.28□□□□□ -1.4
SHROOM1Q2M3G4 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.28□□□□□ -1.4
SHROOM1Q2M3G4 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.28□□□□□ -1.4
SHROOM1Q2M3G4 KRT8P51-201ENST00000438938 274 ntBASIC6.28□□□□□ -1.4
SHROOM1Q2M3G4 GAPDHP25-201ENST00000447061 1001 ntBASIC6.28□□□□□ -1.4
SHROOM1Q2M3G4 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC6.28□□□□□ -1.4
SHROOM1Q2M3G4 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC6.28□□□□□ -1.4
SHROOM1Q2M3G4 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
SHROOM1Q2M3G4 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
SHROOM1Q2M3G4 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC6.28□□□□□ -1.4
SHROOM1Q2M3G4 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC6.28□□□□□ -1.4
SHROOM1Q2M3G4 RPS4XP20-201ENST00000505751 772 ntBASIC6.28□□□□□ -1.4
SHROOM1Q2M3G4 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SHROOM1Q2M3G4 AC021106.1-201ENST00000509020 1058 ntBASIC6.28□□□□□ -1.4
SHROOM1Q2M3G4 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.28□□□□□ -1.4
SHROOM1Q2M3G4 AC134349.2-201ENST00000535136 910 ntBASIC6.28□□□□□ -1.4
SHROOM1Q2M3G4 AL390726.5-202ENST00000564800 256 ntBASIC6.28□□□□□ -1.4
SHROOM1Q2M3G4 AC060780.2-201ENST00000589047 198 ntBASIC6.28□□□□□ -1.4
SHROOM1Q2M3G4 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.28□□□□□ -1.4
SHROOM1Q2M3G4 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.28□□□□□ -1.4
SHROOM1Q2M3G4 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
SHROOM1Q2M3G4 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC6.28□□□□□ -1.4
SHROOM1Q2M3G4 AC003973.3-201ENST00000624863 2822 ntBASIC6.28□□□□□ -1.4
SHROOM1Q2M3G4 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
SHROOM1Q2M3G4 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
SHROOM1Q2M3G4 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.4
SHROOM1Q2M3G4 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SHROOM1Q2M3G4 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.27□□□□□ -1.41
SHROOM1Q2M3G4 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
SHROOM1Q2M3G4 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SHROOM1Q2M3G4 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SHROOM1Q2M3G4 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC6.27□□□□□ -1.41
SHROOM1Q2M3G4 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.27□□□□□ -1.41
SHROOM1Q2M3G4 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.27□□□□□ -1.41
SHROOM1Q2M3G4 AC114774.1-201ENST00000507410 1770 ntBASIC6.27□□□□□ -1.41
SHROOM1Q2M3G4 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SHROOM1Q2M3G4 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
SHROOM1Q2M3G4 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC6.27□□□□□ -1.41
SHROOM1Q2M3G4 RNA5SP487-201ENST00000410186 122 ntBASIC6.27□□□□□ -1.41
SHROOM1Q2M3G4 RNU2-22P-201ENST00000411266 212 ntBASIC6.27□□□□□ -1.41
SHROOM1Q2M3G4 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC6.27□□□□□ -1.41
SHROOM1Q2M3G4 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC6.27□□□□□ -1.41
SHROOM1Q2M3G4 RBMY2KP-201ENST00000418221 992 ntBASIC6.27□□□□□ -1.41
SHROOM1Q2M3G4 AC093162.1-201ENST00000419682 124 ntBASIC6.27□□□□□ -1.41
SHROOM1Q2M3G4 AC093655.2-201ENST00000425735 631 ntBASIC6.27□□□□□ -1.41
SHROOM1Q2M3G4 RPSAP41-201ENST00000439695 860 ntBASIC6.27□□□□□ -1.41
SHROOM1Q2M3G4 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.27□□□□□ -1.41
SHROOM1Q2M3G4 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SHROOM1Q2M3G4 DNAJB5P1-201ENST00000454004 806 ntBASIC6.27□□□□□ -1.41
SHROOM1Q2M3G4 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC6.27□□□□□ -1.41
SHROOM1Q2M3G4 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
SHROOM1Q2M3G4 NDUFB5P1-201ENST00000508134 564 ntBASIC6.27□□□□□ -1.41
SHROOM1Q2M3G4 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms