Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.21□□□□□ -1.42
CCNA1P78396 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC6.21□□□□□ -1.42
CCNA1P78396 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC6.21□□□□□ -1.42
CCNA1P78396 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC6.21□□□□□ -1.42
CCNA1P78396 AC090142.2-201ENST00000483263 416 ntBASIC6.21□□□□□ -1.42
CCNA1P78396 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
CCNA1P78396 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.21□□□□□ -1.42
CCNA1P78396 AC127381.1-201ENST00000555979 939 ntBASIC6.21□□□□□ -1.42
CCNA1P78396 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.21□□□□□ -1.42
CCNA1P78396 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC6.21□□□□□ -1.42
CCNA1P78396 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC6.21□□□□□ -1.42
CCNA1P78396 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC6.21□□□□□ -1.42
CCNA1P78396 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC6.21□□□□□ -1.42
CCNA1P78396 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.21□□□□□ -1.42
CCNA1P78396 RNU6-84P-201ENST00000607737 102 ntBASIC6.21□□□□□ -1.42
CCNA1P78396 AC099494.2-201ENST00000623371 978 ntBASIC6.21□□□□□ -1.42
CCNA1P78396 AL353662.3-201ENST00000625131 237 ntBASIC6.21□□□□□ -1.42
CCNA1P78396 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.21□□□□□ -1.42
CCNA1P78396 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC6.21□□□□□ -1.42
CCNA1P78396 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
CCNA1P78396 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CCNA1P78396 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CCNA1P78396 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CCNA1P78396 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CCNA1P78396 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
CCNA1P78396 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC6.21□□□□□ -1.42
CCNA1P78396 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.21□□□□□ -1.42
CCNA1P78396 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
CCNA1P78396 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CCNA1P78396 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.42
CCNA1P78396 BCORP1-203ENST00000513194 5093 ntBASIC6.21□□□□□ -1.42
CCNA1P78396 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCNA1P78396 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCNA1P78396 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCNA1P78396 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.2□□□□□ -1.42
CCNA1P78396 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCNA1P78396 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCNA1P78396 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.2□□□□□ -1.42
CCNA1P78396 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
CCNA1P78396 MFSD4BP1-201ENST00000513330 1552 ntBASIC6.2□□□□□ -1.42
CCNA1P78396 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
CCNA1P78396 RNA5SP326-201ENST00000363209 110 ntBASIC6.2□□□□□ -1.42
CCNA1P78396 HSPA8P15-201ENST00000401676 786 ntBASIC6.2□□□□□ -1.42
CCNA1P78396 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC6.2□□□□□ -1.42
CCNA1P78396 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
CCNA1P78396 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC6.2□□□□□ -1.42
CCNA1P78396 AC117434.1-201ENST00000419971 836 ntBASIC6.2□□□□□ -1.42
CCNA1P78396 RBMY2QP-201ENST00000429799 1147 ntBASIC6.2□□□□□ -1.42
CCNA1P78396 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.2□□□□□ -1.42
CCNA1P78396 PA2G4P6-201ENST00000438325 1197 ntBASIC6.2□□□□□ -1.42
CCNA1P78396 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.2□□□□□ -1.42
CCNA1P78396 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.2□□□□□ -1.42
CCNA1P78396 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC6.2□□□□□ -1.42
CCNA1P78396 Z92846.1-201ENST00000456203 268 ntBASIC6.2□□□□□ -1.42
CCNA1P78396 AC108161.1-201ENST00000461060 402 ntBASIC6.2□□□□□ -1.42
CCNA1P78396 AC128716.1-201ENST00000475129 166 ntBASIC6.2□□□□□ -1.42
CCNA1P78396 EIF3KP3-201ENST00000514461 639 ntBASIC6.2□□□□□ -1.42
CCNA1P78396 RNA5SP228-201ENST00000516232 133 ntBASIC6.2□□□□□ -1.42
CCNA1P78396 RN7SKP248-201ENST00000516278 305 ntBASIC6.2□□□□□ -1.42
CCNA1P78396 RN7SKP147-201ENST00000517154 244 ntBASIC6.2□□□□□ -1.42
CCNA1P78396 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.2□□□□□ -1.42
CCNA1P78396 HIGD1AP5-201ENST00000529959 259 ntBASIC6.2□□□□□ -1.42
CCNA1P78396 OR5AM1P-201ENST00000532136 1032 ntBASIC6.2□□□□□ -1.42
CCNA1P78396 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC6.2□□□□□ -1.42
CCNA1P78396 AC021422.1-201ENST00000621212 473 ntBASIC6.2□□□□□ -1.42
CCNA1P78396 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC6.2□□□□□ -1.42
CCNA1P78396 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCNA1P78396 OR4F13P-202ENST00000560066 2054 ntBASIC6.2□□□□□ -1.42
CCNA1P78396 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.2□□□□□ -1.42
CCNA1P78396 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCNA1P78396 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.2□□□□□ -1.42
CCNA1P78396 AC068769.1-201ENST00000474767 2426 ntBASIC6.2□□□□□ -1.42
CCNA1P78396 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.2□□□□□ -1.42
CCNA1P78396 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
CCNA1P78396 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCNA1P78396 NAMPTP1-201ENST00000440465 2514 ntBASIC6.2□□□□□ -1.42
CCNA1P78396 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCNA1P78396 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCNA1P78396 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCNA1P78396 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CCNA1P78396 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CCNA1P78396 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.19□□□□□ -1.42
CCNA1P78396 AL035419.1-201ENST00000397037 564 ntBASIC6.19□□□□□ -1.42
CCNA1P78396 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.19□□□□□ -1.42
CCNA1P78396 RIMKLBP2-201ENST00000424737 654 ntBASIC6.19□□□□□ -1.42
CCNA1P78396 AC009784.1-201ENST00000426484 460 ntBASIC6.19□□□□□ -1.42
CCNA1P78396 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.19□□□□□ -1.42
CCNA1P78396 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC6.19□□□□□ -1.42
CCNA1P78396 AC090114.3-201ENST00000479267 829 ntBASIC6.19□□□□□ -1.42
CCNA1P78396 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC6.19□□□□□ -1.42
CCNA1P78396 UBE2Q2P10-201ENST00000514854 900 ntBASIC6.19□□□□□ -1.42
CCNA1P78396 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC6.19□□□□□ -1.42
CCNA1P78396 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.19□□□□□ -1.42
CCNA1P78396 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.19□□□□□ -1.42
CCNA1P78396 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC6.19□□□□□ -1.42
CCNA1P78396 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC6.19□□□□□ -1.42
CCNA1P78396 AC005084.1-201ENST00000605160 304 ntBASIC6.19□□□□□ -1.42
CCNA1P78396 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6.19□□□□□ -1.42
CCNA1P78396 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC6.19□□□□□ -1.42
CCNA1P78396 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms