Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
COPB1P53618 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.42
COPB1P53618 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
COPB1P53618 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
COPB1P53618 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
COPB1P53618 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
COPB1P53618 RNA5SP273-201ENST00000362484 113 ntBASIC6.15□□□□□ -1.42
COPB1P53618 SNORA27.3-201ENST00000364937 134 ntBASIC6.15□□□□□ -1.42
COPB1P53618 AC079809.1-201ENST00000415468 276 ntBASIC6.15□□□□□ -1.42
COPB1P53618 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
COPB1P53618 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.15□□□□□ -1.42
COPB1P53618 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC6.15□□□□□ -1.42
COPB1P53618 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC6.15□□□□□ -1.42
COPB1P53618 AC073465.2-201ENST00000440938 498 ntBASIC6.15□□□□□ -1.42
COPB1P53618 OR2AF1P-201ENST00000454899 889 ntBASIC6.15□□□□□ -1.42
COPB1P53618 RPS17P15-201ENST00000475609 349 ntBASIC6.15□□□□□ -1.42
COPB1P53618 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
COPB1P53618 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.15□□□□□ -1.42
COPB1P53618 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC6.15□□□□□ -1.42
COPB1P53618 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC6.15□□□□□ -1.42
COPB1P53618 TRIM51DP-201ENST00000529746 596 ntBASIC6.15□□□□□ -1.42
COPB1P53618 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.15□□□□□ -1.42
COPB1P53618 OR8X1P-201ENST00000534542 869 ntBASIC6.15□□□□□ -1.42
COPB1P53618 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
COPB1P53618 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC6.15□□□□□ -1.42
COPB1P53618 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
COPB1P53618 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC6.15□□□□□ -1.42
COPB1P53618 AC027176.2-201ENST00000559166 746 ntBASIC6.15□□□□□ -1.42
COPB1P53618 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.15□□□□□ -1.42
COPB1P53618 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.15□□□□□ -1.42
COPB1P53618 FAM27E4-201ENST00000605259 342 ntBASIC6.15□□□□□ -1.42
COPB1P53618 RPL12P48-201ENST00000605620 304 ntBASIC6.15□□□□□ -1.42
COPB1P53618 AC090912.3-201ENST00000609775 533 ntBASIC6.15□□□□□ -1.42
COPB1P53618 AL356608.1-201ENST00000610034 820 ntBASIC6.15□□□□□ -1.42
COPB1P53618 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC6.15□□□□□ -1.42
COPB1P53618 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
COPB1P53618 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
COPB1P53618 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
COPB1P53618 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.15□□□□□ -1.43
COPB1P53618 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC6.15□□□□□ -1.43
COPB1P53618 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.14□□□□□ -1.43
COPB1P53618 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COPB1P53618 GTF2IP4-201ENST00000453092 2054 ntBASIC6.14□□□□□ -1.43
COPB1P53618 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
COPB1P53618 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
COPB1P53618 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
COPB1P53618 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
COPB1P53618 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
COPB1P53618 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.14□□□□□ -1.43
COPB1P53618 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COPB1P53618 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COPB1P53618 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COPB1P53618 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
COPB1P53618 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COPB1P53618 RPSAP35-201ENST00000413753 818 ntBASIC6.14□□□□□ -1.43
COPB1P53618 SETP9-201ENST00000423837 832 ntBASIC6.14□□□□□ -1.43
COPB1P53618 BX323845.3-201ENST00000428215 527 ntBASIC6.14□□□□□ -1.43
COPB1P53618 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.14□□□□□ -1.43
COPB1P53618 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC6.14□□□□□ -1.43
COPB1P53618 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.14□□□□□ -1.43
COPB1P53618 AC068228.1-201ENST00000461723 211 ntBASIC6.14□□□□□ -1.43
COPB1P53618 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC6.14□□□□□ -1.43
COPB1P53618 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
COPB1P53618 AC093801.2-201ENST00000503966 1050 ntBASIC6.14□□□□□ -1.43
COPB1P53618 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC6.14□□□□□ -1.43
COPB1P53618 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
COPB1P53618 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.14□□□□□ -1.43
COPB1P53618 RNU4ATAC18P-201ENST00000516179 126 ntBASIC6.14□□□□□ -1.43
COPB1P53618 RNA5SP438-201ENST00000516561 112 ntBASIC6.14□□□□□ -1.43
COPB1P53618 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.14□□□□□ -1.43
COPB1P53618 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
COPB1P53618 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.14□□□□□ -1.43
COPB1P53618 AC079905.1-201ENST00000549280 475 ntBASIC6.14□□□□□ -1.43
COPB1P53618 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.14□□□□□ -1.43
COPB1P53618 CYCSP38-201ENST00000559840 322 ntBASIC6.14□□□□□ -1.43
COPB1P53618 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC6.14□□□□□ -1.43
COPB1P53618 MIR4311-201ENST00000580794 100 ntBASIC6.14□□□□□ -1.43
COPB1P53618 AC015911.5-201ENST00000587076 451 ntBASIC6.14□□□□□ -1.43
COPB1P53618 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC6.14□□□□□ -1.43
COPB1P53618 AC006116.7-201ENST00000590141 756 ntBASIC6.14□□□□□ -1.43
COPB1P53618 AC063977.5-201ENST00000601044 974 ntBASIC6.14□□□□□ -1.43
COPB1P53618 AC133794.1-201ENST00000602731 914 ntBASIC6.14□□□□□ -1.43
COPB1P53618 AC096947.1-201ENST00000603233 470 ntBASIC6.14□□□□□ -1.43
COPB1P53618 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC6.14□□□□□ -1.43
COPB1P53618 AL050303.3-201ENST00000613704 284 ntBASIC6.14□□□□□ -1.43
COPB1P53618 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC6.14□□□□□ -1.43
COPB1P53618 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC6.14□□□□□ -1.43
COPB1P53618 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.14□□□□□ -1.43
COPB1P53618 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
COPB1P53618 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COPB1P53618 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC6.14□□□□□ -1.43
COPB1P53618 AL627171.1-201ENST00000618845 1308 ntBASIC6.14□□□□□ -1.43
COPB1P53618 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COPB1P53618 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.14□□□□□ -1.43
COPB1P53618 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COPB1P53618 AL359715.3-201ENST00000569267 2123 ntBASIC6.14□□□□□ -1.43
COPB1P53618 LYARP1-201ENST00000436977 1501 ntBASIC6.14□□□□□ -1.43
COPB1P53618 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
COPB1P53618 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
COPB1P53618 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms