Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NKX2-1P43699 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
NKX2-1P43699 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NKX2-1P43699 AC007996.1-201ENST00000620414 2821 ntBASIC4.72□□□□□ -1.65
NKX2-1P43699 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.72□□□□□ -1.65
NKX2-1P43699 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NKX2-1P43699 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NKX2-1P43699 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4.72□□□□□ -1.65
NKX2-1P43699 AL359715.4-201ENST00000606629 1436 ntBASIC4.72□□□□□ -1.65
NKX2-1P43699 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
NKX2-1P43699 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
NKX2-1P43699 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.65
NKX2-1P43699 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
NKX2-1P43699 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.71□□□□□ -1.65
NKX2-1P43699 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.71□□□□□ -1.66
NKX2-1P43699 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NKX2-1P43699 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NKX2-1P43699 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NKX2-1P43699 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NKX2-1P43699 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
NKX2-1P43699 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NKX2-1P43699 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NKX2-1P43699 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.71□□□□□ -1.66
NKX2-1P43699 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC4.71□□□□□ -1.66
NKX2-1P43699 RNU4-31P-201ENST00000384211 141 ntBASIC4.71□□□□□ -1.66
NKX2-1P43699 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
NKX2-1P43699 U3.28-201ENST00000391249 210 ntBASIC4.71□□□□□ -1.66
NKX2-1P43699 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
NKX2-1P43699 PTGES3P2-201ENST00000407942 482 ntBASIC4.71□□□□□ -1.66
NKX2-1P43699 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC4.71□□□□□ -1.66
NKX2-1P43699 AL359885.1-201ENST00000415786 903 ntBASIC4.71□□□□□ -1.66
NKX2-1P43699 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.71□□□□□ -1.66
NKX2-1P43699 NDUFA5P10-201ENST00000432147 357 ntBASIC4.71□□□□□ -1.66
NKX2-1P43699 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NKX2-1P43699 AL445928.1-201ENST00000435545 222 ntBASIC4.71□□□□□ -1.66
NKX2-1P43699 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.71□□□□□ -1.66
NKX2-1P43699 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC4.71□□□□□ -1.66
NKX2-1P43699 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC4.71□□□□□ -1.66
NKX2-1P43699 RPL23AP23-201ENST00000452590 471 ntBASIC4.71□□□□□ -1.66
NKX2-1P43699 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC4.71□□□□□ -1.66
NKX2-1P43699 AC037198.2-201ENST00000478845 733 ntBASIC4.71□□□□□ -1.66
NKX2-1P43699 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC4.71□□□□□ -1.66
NKX2-1P43699 NPM1P29-201ENST00000483112 803 ntBASIC4.71□□□□□ -1.66
NKX2-1P43699 AC008629.2-201ENST00000503783 483 ntBASIC4.71□□□□□ -1.66
NKX2-1P43699 AC095052.1-201ENST00000509955 863 ntBASIC4.71□□□□□ -1.66
NKX2-1P43699 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NKX2-1P43699 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC4.71□□□□□ -1.66
NKX2-1P43699 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.71□□□□□ -1.66
NKX2-1P43699 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.71□□□□□ -1.66
NKX2-1P43699 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.71□□□□□ -1.66
NKX2-1P43699 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
NKX2-1P43699 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC4.71□□□□□ -1.66
NKX2-1P43699 GARSP1-201ENST00000570895 719 ntBASIC4.71□□□□□ -1.66
NKX2-1P43699 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC4.71□□□□□ -1.66
NKX2-1P43699 AC011458.1-201ENST00000604034 617 ntBASIC4.71□□□□□ -1.66
NKX2-1P43699 AL139022.2-201ENST00000606934 443 ntBASIC4.71□□□□□ -1.66
NKX2-1P43699 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC4.71□□□□□ -1.66
NKX2-1P43699 AC068726.1-201ENST00000610993 341 ntBASIC4.71□□□□□ -1.66
NKX2-1P43699 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
NKX2-1P43699 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.71□□□□□ -1.66
NKX2-1P43699 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.71□□□□□ -1.66
NKX2-1P43699 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC4.71□□□□□ -1.66
NKX2-1P43699 AL356274.1-201ENST00000617064 410 ntBASIC4.71□□□□□ -1.66
NKX2-1P43699 AL035661.1-201ENST00000620459 1144 ntBASIC4.71□□□□□ -1.66
NKX2-1P43699 AP000943.4-201ENST00000622912 357 ntBASIC4.71□□□□□ -1.66
NKX2-1P43699 AC099654.6-201ENST00000636487 512 ntBASIC4.71□□□□□ -1.66
NKX2-1P43699 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
NKX2-1P43699 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NKX2-1P43699 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
NKX2-1P43699 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NKX2-1P43699 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NKX2-1P43699 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC4.7□□□□□ -1.66
NKX2-1P43699 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.7□□□□□ -1.66
NKX2-1P43699 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
NKX2-1P43699 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
NKX2-1P43699 AC008079.2-201ENST00000623543 20396 ntBASIC4.7□□□□□ -1.66
NKX2-1P43699 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
NKX2-1P43699 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.7□□□□□ -1.66
NKX2-1P43699 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
NKX2-1P43699 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NKX2-1P43699 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.7□□□□□ -1.66
NKX2-1P43699 RNU6-650P-201ENST00000365658 111 ntBASIC4.7□□□□□ -1.66
NKX2-1P43699 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NKX2-1P43699 PEX12P1-201ENST00000400284 1048 ntBASIC4.7□□□□□ -1.66
NKX2-1P43699 PRELID1P1-201ENST00000403549 660 ntBASIC4.7□□□□□ -1.66
NKX2-1P43699 AL132875.1-201ENST00000403623 949 ntBASIC4.7□□□□□ -1.66
NKX2-1P43699 AL136131.1-201ENST00000406079 803 ntBASIC4.7□□□□□ -1.66
NKX2-1P43699 RNU4-74P-201ENST00000411280 161 ntBASIC4.7□□□□□ -1.66
NKX2-1P43699 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC4.7□□□□□ -1.66
NKX2-1P43699 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC4.7□□□□□ -1.66
NKX2-1P43699 RPS4XP5-201ENST00000419038 768 ntBASIC4.7□□□□□ -1.66
NKX2-1P43699 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.7□□□□□ -1.66
NKX2-1P43699 HSPE1P16-201ENST00000426640 348 ntBASIC4.7□□□□□ -1.66
NKX2-1P43699 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC4.7□□□□□ -1.66
NKX2-1P43699 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.7□□□□□ -1.66
NKX2-1P43699 RPS12P17-201ENST00000438591 377 ntBASIC4.7□□□□□ -1.66
NKX2-1P43699 AC023141.8-201ENST00000442554 208 ntBASIC4.7□□□□□ -1.66
NKX2-1P43699 AL356121.1-201ENST00000442911 156 ntBASIC4.7□□□□□ -1.66
NKX2-1P43699 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.7□□□□□ -1.66
NKX2-1P43699 EIF2S2P5-201ENST00000457635 968 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 198.4 ms