Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 RNA5SP234-201ENST00000363916 119 ntBASIC5□□□□□ -1.61
SHC1P29353 RN7SKP28-201ENST00000364770 305 ntBASIC5□□□□□ -1.61
SHC1P29353 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SHC1P29353 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5□□□□□ -1.61
SHC1P29353 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5□□□□□ -1.61
SHC1P29353 SNORA16A-201ENST00000384342 137 ntBASIC5□□□□□ -1.61
SHC1P29353 AL358178.1-201ENST00000407698 397 ntBASIC5□□□□□ -1.61
SHC1P29353 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5□□□□□ -1.61
SHC1P29353 AC007161.1-204ENST00000423039 460 ntBASIC5□□□□□ -1.61
SHC1P29353 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5□□□□□ -1.61
SHC1P29353 EIF4A1P6-201ENST00000448133 1210 ntBASIC5□□□□□ -1.61
SHC1P29353 CBX1P2-201ENST00000453841 458 ntBASIC5□□□□□ -1.61
SHC1P29353 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SHC1P29353 OR52A4P-203ENST00000498233 1014 ntBASIC5□□□□□ -1.61
SHC1P29353 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5□□□□□ -1.61
SHC1P29353 RNA5SP230-201ENST00000517039 122 ntBASIC5□□□□□ -1.61
SHC1P29353 AC138832.1-201ENST00000522871 556 ntBASIC5□□□□□ -1.61
SHC1P29353 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5□□□□□ -1.61
SHC1P29353 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC5□□□□□ -1.61
SHC1P29353 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5□□□□□ -1.61
SHC1P29353 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5□□□□□ -1.61
SHC1P29353 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC5□□□□□ -1.61
SHC1P29353 AC023389.2-201ENST00000580031 955 ntBASIC5□□□□□ -1.61
SHC1P29353 MIR4660-201ENST00000583549 74 ntBASIC5□□□□□ -1.61
SHC1P29353 AC092944.2-201ENST00000605443 889 ntBASIC5□□□□□ -1.61
SHC1P29353 MIR6862-1-201ENST00000613016 70 ntBASIC5□□□□□ -1.61
SHC1P29353 AC073575.2-201ENST00000614212 627 ntBASIC5□□□□□ -1.61
SHC1P29353 MIR6862-2-201ENST00000614755 70 ntBASIC5□□□□□ -1.61
SHC1P29353 AC007683.2-201ENST00000624681 714 ntBASIC5□□□□□ -1.61
SHC1P29353 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
SHC1P29353 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5□□□□□ -1.61
SHC1P29353 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
SHC1P29353 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SHC1P29353 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5□□□□□ -1.61
SHC1P29353 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5□□□□□ -1.61
SHC1P29353 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5□□□□□ -1.61
SHC1P29353 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5□□□□□ -1.61
SHC1P29353 MT-RNR2-201ENST00000387347 1559 ntBASIC4.99□□□□□ -1.61
SHC1P29353 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.99□□□□□ -1.61
SHC1P29353 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.99□□□□□ -1.61
SHC1P29353 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
SHC1P29353 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
SHC1P29353 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SHC1P29353 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.99□□□□□ -1.61
SHC1P29353 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
SHC1P29353 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
SHC1P29353 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
SHC1P29353 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SHC1P29353 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
SHC1P29353 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SHC1P29353 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.99□□□□□ -1.61
SHC1P29353 GAPDHP42-201ENST00000406848 981 ntBASIC4.99□□□□□ -1.61
SHC1P29353 RNF10P1-201ENST00000418589 369 ntBASIC4.99□□□□□ -1.61
SHC1P29353 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC4.99□□□□□ -1.61
SHC1P29353 HMGN2P27-201ENST00000427352 270 ntBASIC4.99□□□□□ -1.61
SHC1P29353 RPL12P18-201ENST00000437175 325 ntBASIC4.99□□□□□ -1.61
SHC1P29353 AC092106.1-201ENST00000444291 373 ntBASIC4.99□□□□□ -1.61
SHC1P29353 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
SHC1P29353 PPIAP20-201ENST00000449839 135 ntBASIC4.99□□□□□ -1.61
SHC1P29353 OR7L1P-201ENST00000456181 380 ntBASIC4.99□□□□□ -1.61
SHC1P29353 RPL35AP19-201ENST00000469425 329 ntBASIC4.99□□□□□ -1.61
SHC1P29353 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
SHC1P29353 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.99□□□□□ -1.61
SHC1P29353 NRBF2P4-201ENST00000520874 850 ntBASIC4.99□□□□□ -1.61
SHC1P29353 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.99□□□□□ -1.61
SHC1P29353 AC079064.1-201ENST00000528365 362 ntBASIC4.99□□□□□ -1.61
SHC1P29353 AP003168.1-201ENST00000530091 307 ntBASIC4.99□□□□□ -1.61
SHC1P29353 OR5AM1P-201ENST00000532136 1032 ntBASIC4.99□□□□□ -1.61
SHC1P29353 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.99□□□□□ -1.61
SHC1P29353 AC122688.1-201ENST00000541494 223 ntBASIC4.99□□□□□ -1.61
SHC1P29353 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.99□□□□□ -1.61
SHC1P29353 SNRPGP1-201ENST00000553864 222 ntBASIC4.99□□□□□ -1.61
SHC1P29353 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.99□□□□□ -1.61
SHC1P29353 AC012616.1-201ENST00000600294 197 ntBASIC4.99□□□□□ -1.61
SHC1P29353 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC4.99□□□□□ -1.61
SHC1P29353 FAM72A-208ENST00000607379 1139 ntBASIC4.99□□□□□ -1.61
SHC1P29353 AC239803.2-201ENST00000610161 430 ntBASIC4.99□□□□□ -1.61
SHC1P29353 NF1P10-201ENST00000613227 742 ntBASIC4.99□□□□□ -1.61
SHC1P29353 MIR6729-201ENST00000618194 65 ntBASIC4.99□□□□□ -1.61
SHC1P29353 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.99□□□□□ -1.61
SHC1P29353 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.99□□□□□ -1.61
SHC1P29353 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC4.99□□□□□ -1.61
SHC1P29353 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.99□□□□□ -1.61
SHC1P29353 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
SHC1P29353 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SHC1P29353 AC092376.2-201ENST00000622621 4116 ntBASIC4.99□□□□□ -1.61
SHC1P29353 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SHC1P29353 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.99□□□□□ -1.61
SHC1P29353 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
SHC1P29353 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
SHC1P29353 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.98□□□□□ -1.61
SHC1P29353 AC083899.1-201ENST00000454465 3819 ntBASIC4.98□□□□□ -1.61
SHC1P29353 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
SHC1P29353 AL360270.2-201ENST00000562952 5985 ntBASIC4.98□□□□□ -1.61
SHC1P29353 HSPA8P14-201ENST00000552265 1805 ntBASIC4.98□□□□□ -1.61
SHC1P29353 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
SHC1P29353 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SHC1P29353 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.98□□□□□ -1.61
SHC1P29353 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SHC1P29353 RNA5SP435-201ENST00000364044 108 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms