Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AL049779.3-201ENST00000557141 606 ntBASIC5.48□□□□□ -1.53
ABCD3P28288 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC5.48□□□□□ -1.53
ABCD3P28288 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC5.48□□□□□ -1.53
ABCD3P28288 ABI1P1-201ENST00000603375 1120 ntBASIC5.48□□□□□ -1.53
ABCD3P28288 LSM1P2-201ENST00000604911 322 ntBASIC5.48□□□□□ -1.53
ABCD3P28288 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.48□□□□□ -1.53
ABCD3P28288 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.48□□□□□ -1.53
ABCD3P28288 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.48□□□□□ -1.53
ABCD3P28288 AL391262.2-201ENST00000622466 494 ntBASIC5.48□□□□□ -1.53
ABCD3P28288 AC007342.8-201ENST00000623278 678 ntBASIC5.48□□□□□ -1.53
ABCD3P28288 AC010435.1-201ENST00000623353 1177 ntBASIC5.48□□□□□ -1.53
ABCD3P28288 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.48□□□□□ -1.53
ABCD3P28288 MIR1910-201ENST00000636955 80 ntBASIC5.48□□□□□ -1.53
ABCD3P28288 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.48□□□□□ -1.53
ABCD3P28288 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.48□□□□□ -1.53
ABCD3P28288 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ABCD3P28288 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
ABCD3P28288 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
ABCD3P28288 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.48□□□□□ -1.53
ABCD3P28288 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ABCD3P28288 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
ABCD3P28288 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.48□□□□□ -1.53
ABCD3P28288 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
ABCD3P28288 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.48□□□□□ -1.53
ABCD3P28288 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
ABCD3P28288 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
ABCD3P28288 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.47□□□□□ -1.53
ABCD3P28288 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
ABCD3P28288 AP001284.1-201ENST00000528393 2118 ntBASIC5.47□□□□□ -1.53
ABCD3P28288 AC022164.1-201ENST00000568767 2673 ntBASIC5.47□□□□□ -1.53
ABCD3P28288 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
ABCD3P28288 AC027088.4-201ENST00000611559 1947 ntBASIC5.47□□□□□ -1.53
ABCD3P28288 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.47□□□□□ -1.53
ABCD3P28288 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
ABCD3P28288 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
ABCD3P28288 RN7SKP128-201ENST00000364270 303 ntBASIC5.47□□□□□ -1.53
ABCD3P28288 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.47□□□□□ -1.53
ABCD3P28288 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
ABCD3P28288 AL096800.1-201ENST00000405326 893 ntBASIC5.47□□□□□ -1.53
ABCD3P28288 HMGB1P13-201ENST00000406019 642 ntBASIC5.47□□□□□ -1.53
ABCD3P28288 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.47□□□□□ -1.53
ABCD3P28288 RPS4XP5-201ENST00000419038 768 ntBASIC5.47□□□□□ -1.53
ABCD3P28288 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.47□□□□□ -1.53
ABCD3P28288 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.47□□□□□ -1.53
ABCD3P28288 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.47□□□□□ -1.53
ABCD3P28288 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC5.47□□□□□ -1.53
ABCD3P28288 YWHAZP2-201ENST00000440317 728 ntBASIC5.47□□□□□ -1.53
ABCD3P28288 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.47□□□□□ -1.53
ABCD3P28288 AC069540.1-201ENST00000446320 988 ntBASIC5.47□□□□□ -1.53
ABCD3P28288 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.47□□□□□ -1.53
ABCD3P28288 RPL32P14-201ENST00000463196 378 ntBASIC5.47□□□□□ -1.53
ABCD3P28288 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.47□□□□□ -1.53
ABCD3P28288 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.47□□□□□ -1.53
ABCD3P28288 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.47□□□□□ -1.53
ABCD3P28288 AC121161.1-201ENST00000510606 652 ntBASIC5.47□□□□□ -1.53
ABCD3P28288 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.47□□□□□ -1.53
ABCD3P28288 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.47□□□□□ -1.53
ABCD3P28288 RN7SKP288-201ENST00000516227 268 ntBASIC5.47□□□□□ -1.53
ABCD3P28288 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.47□□□□□ -1.53
ABCD3P28288 BUD31P1-201ENST00000521828 359 ntBASIC5.47□□□□□ -1.53
ABCD3P28288 AP003102.1-201ENST00000525638 661 ntBASIC5.47□□□□□ -1.53
ABCD3P28288 C1DP5-201ENST00000525775 383 ntBASIC5.47□□□□□ -1.53
ABCD3P28288 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.47□□□□□ -1.53
ABCD3P28288 AC006518.1-201ENST00000541449 943 ntBASIC5.47□□□□□ -1.53
ABCD3P28288 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.47□□□□□ -1.53
ABCD3P28288 AC104229.1-201ENST00000561364 255 ntBASIC5.47□□□□□ -1.53
ABCD3P28288 AC018552.1-201ENST00000562099 811 ntBASIC5.47□□□□□ -1.53
ABCD3P28288 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.47□□□□□ -1.53
ABCD3P28288 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.47□□□□□ -1.53
ABCD3P28288 AC006116.7-201ENST00000590141 756 ntBASIC5.47□□□□□ -1.53
ABCD3P28288 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.47□□□□□ -1.53
ABCD3P28288 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
ABCD3P28288 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.47□□□□□ -1.53
ABCD3P28288 AC108865.2-201ENST00000606881 432 ntBASIC5.47□□□□□ -1.53
ABCD3P28288 MIR6778-201ENST00000617912 73 ntBASIC5.47□□□□□ -1.53
ABCD3P28288 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.47□□□□□ -1.53
ABCD3P28288 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ABCD3P28288 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ABCD3P28288 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
ABCD3P28288 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
ABCD3P28288 PARP4P2-201ENST00000446672 3326 ntBASIC5.47□□□□□ -1.53
ABCD3P28288 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.47□□□□□ -1.53
ABCD3P28288 AC008432.1-201ENST00000615912 1320 ntBASIC5.47□□□□□ -1.53
ABCD3P28288 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
ABCD3P28288 AC025470.1-201ENST00000510053 2032 ntBASIC5.47□□□□□ -1.53
ABCD3P28288 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.53
ABCD3P28288 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
ABCD3P28288 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
ABCD3P28288 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.46□□□□□ -1.53
ABCD3P28288 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ABCD3P28288 HSPA8P17-201ENST00000427029 1382 ntBASIC5.46□□□□□ -1.54
ABCD3P28288 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
ABCD3P28288 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
ABCD3P28288 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
ABCD3P28288 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
ABCD3P28288 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
ABCD3P28288 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.54
ABCD3P28288 TMSB4XP2-201ENST00000335179 210 ntBASIC5.46□□□□□ -1.54
ABCD3P28288 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
ABCD3P28288 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 150.5 ms