Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PDGFRAP16234 MTCO1P11-201ENST00000429111 1528 ntBASIC5.79□□□□□ -1.48
PDGFRAP16234 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PDGFRAP16234 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PDGFRAP16234 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
PDGFRAP16234 RNU6-697P-201ENST00000363348 107 ntBASIC5.79□□□□□ -1.48
PDGFRAP16234 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.79□□□□□ -1.48
PDGFRAP16234 RNU6-891P-201ENST00000384280 111 ntBASIC5.79□□□□□ -1.48
PDGFRAP16234 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
PDGFRAP16234 RAB9AP4-201ENST00000415230 609 ntBASIC5.79□□□□□ -1.48
PDGFRAP16234 AL158827.1-201ENST00000416300 391 ntBASIC5.79□□□□□ -1.48
PDGFRAP16234 AC244453.4-201ENST00000419150 388 ntBASIC5.79□□□□□ -1.48
PDGFRAP16234 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.79□□□□□ -1.48
PDGFRAP16234 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PDGFRAP16234 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.79□□□□□ -1.48
PDGFRAP16234 RCC2P2-201ENST00000422174 918 ntBASIC5.79□□□□□ -1.48
PDGFRAP16234 AL121776.1-201ENST00000429337 372 ntBASIC5.79□□□□□ -1.48
PDGFRAP16234 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.79□□□□□ -1.48
PDGFRAP16234 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.79□□□□□ -1.48
PDGFRAP16234 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.79□□□□□ -1.48
PDGFRAP16234 AC097523.2-201ENST00000435551 652 ntBASIC5.79□□□□□ -1.48
PDGFRAP16234 OR6D1P-201ENST00000436165 939 ntBASIC5.79□□□□□ -1.48
PDGFRAP16234 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.79□□□□□ -1.48
PDGFRAP16234 AGGF1P3-201ENST00000493675 1213 ntBASIC5.79□□□□□ -1.48
PDGFRAP16234 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.79□□□□□ -1.48
PDGFRAP16234 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.79□□□□□ -1.48
PDGFRAP16234 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.79□□□□□ -1.48
PDGFRAP16234 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PDGFRAP16234 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.79□□□□□ -1.48
PDGFRAP16234 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.79□□□□□ -1.48
PDGFRAP16234 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PDGFRAP16234 MIR1273E-201ENST00000581165 102 ntBASIC5.79□□□□□ -1.48
PDGFRAP16234 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.79□□□□□ -1.48
PDGFRAP16234 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.79□□□□□ -1.48
PDGFRAP16234 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.79□□□□□ -1.48
PDGFRAP16234 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.79□□□□□ -1.48
PDGFRAP16234 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.79□□□□□ -1.48
PDGFRAP16234 BNIP3P7-201ENST00000605641 516 ntBASIC5.79□□□□□ -1.48
PDGFRAP16234 AL139124.1-201ENST00000609123 421 ntBASIC5.79□□□□□ -1.48
PDGFRAP16234 MIR6768-201ENST00000610734 72 ntBASIC5.79□□□□□ -1.48
PDGFRAP16234 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.79□□□□□ -1.48
PDGFRAP16234 NLRP3P1-201ENST00000622303 1785 ntBASIC5.79□□□□□ -1.48
PDGFRAP16234 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PDGFRAP16234 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PDGFRAP16234 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PDGFRAP16234 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
PDGFRAP16234 ABCC13-202ENST00000463099 3842 ntBASIC5.79□□□□□ -1.48
PDGFRAP16234 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.79□□□□□ -1.48
PDGFRAP16234 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.79□□□□□ -1.48
PDGFRAP16234 AC079097.1-201ENST00000512187 1399 ntBASIC5.79□□□□□ -1.48
PDGFRAP16234 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.79□□□□□ -1.48
PDGFRAP16234 MTCO1P15-201ENST00000529569 1526 ntBASIC5.79□□□□□ -1.48
PDGFRAP16234 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
PDGFRAP16234 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
PDGFRAP16234 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDGFRAP16234 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PDGFRAP16234 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.78□□□□□ -1.48
PDGFRAP16234 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PDGFRAP16234 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PDGFRAP16234 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDGFRAP16234 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDGFRAP16234 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
PDGFRAP16234 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
PDGFRAP16234 RNU4-2-201ENST00000365668 141 ntBASIC5.78□□□□□ -1.48
PDGFRAP16234 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
PDGFRAP16234 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
PDGFRAP16234 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDGFRAP16234 AL133482.1-201ENST00000415988 498 ntBASIC5.78□□□□□ -1.48
PDGFRAP16234 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.78□□□□□ -1.48
PDGFRAP16234 BX276092.6-201ENST00000430476 250 ntBASIC5.78□□□□□ -1.48
PDGFRAP16234 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.78□□□□□ -1.48
PDGFRAP16234 AL359265.1-201ENST00000440296 795 ntBASIC5.78□□□□□ -1.48
PDGFRAP16234 AC073465.2-201ENST00000440938 498 ntBASIC5.78□□□□□ -1.48
PDGFRAP16234 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.78□□□□□ -1.48
PDGFRAP16234 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.78□□□□□ -1.48
PDGFRAP16234 AC023271.1-201ENST00000445936 1090 ntBASIC5.78□□□□□ -1.48
PDGFRAP16234 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.78□□□□□ -1.48
PDGFRAP16234 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.78□□□□□ -1.48
PDGFRAP16234 BX276092.8-201ENST00000455722 250 ntBASIC5.78□□□□□ -1.48
PDGFRAP16234 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.78□□□□□ -1.48
PDGFRAP16234 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.78□□□□□ -1.48
PDGFRAP16234 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PDGFRAP16234 RPL7L1P4-201ENST00000513004 707 ntBASIC5.78□□□□□ -1.48
PDGFRAP16234 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.78□□□□□ -1.48
PDGFRAP16234 NRBF2P4-201ENST00000520874 850 ntBASIC5.78□□□□□ -1.48
PDGFRAP16234 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.78□□□□□ -1.48
PDGFRAP16234 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.78□□□□□ -1.48
PDGFRAP16234 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.78□□□□□ -1.48
PDGFRAP16234 GMCL1P2-201ENST00000605230 823 ntBASIC5.78□□□□□ -1.48
PDGFRAP16234 AC073575.2-201ENST00000614212 627 ntBASIC5.78□□□□□ -1.48
PDGFRAP16234 MIR6886-201ENST00000619864 61 ntBASIC5.78□□□□□ -1.48
PDGFRAP16234 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.78□□□□□ -1.48
PDGFRAP16234 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDGFRAP16234 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.78□□□□□ -1.48
PDGFRAP16234 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDGFRAP16234 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PDGFRAP16234 LINC01963-201ENST00000562038 3148 ntBASIC5.78□□□□□ -1.48
PDGFRAP16234 AC006206.1-201ENST00000544842 3387 ntBASIC5.78□□□□□ -1.48
PDGFRAP16234 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PDGFRAP16234 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms