Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.63□□□□□ -1.35
HLA-DOAP06340 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.63□□□□□ -1.35
HLA-DOAP06340 VN1R87P-201ENST00000596706 487 ntBASIC6.63□□□□□ -1.35
HLA-DOAP06340 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
HLA-DOAP06340 HIRAP1-201ENST00000605318 787 ntBASIC6.63□□□□□ -1.35
HLA-DOAP06340 AL512329.2-201ENST00000607350 548 ntBASIC6.63□□□□□ -1.35
HLA-DOAP06340 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC6.63□□□□□ -1.35
HLA-DOAP06340 AL109659.3-201ENST00000624985 950 ntBASIC6.63□□□□□ -1.35
HLA-DOAP06340 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.63□□□□□ -1.35
HLA-DOAP06340 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.63□□□□□ -1.35
HLA-DOAP06340 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
HLA-DOAP06340 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
HLA-DOAP06340 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HLA-DOAP06340 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
HLA-DOAP06340 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.63□□□□□ -1.35
HLA-DOAP06340 AC018809.2-201ENST00000602436 3823 ntBASIC6.63□□□□□ -1.35
HLA-DOAP06340 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HLA-DOAP06340 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HLA-DOAP06340 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
HLA-DOAP06340 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HLA-DOAP06340 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
HLA-DOAP06340 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.62□□□□□ -1.35
HLA-DOAP06340 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.62□□□□□ -1.35
HLA-DOAP06340 AL513548.1-201ENST00000562904 1724 ntBASIC6.62□□□□□ -1.35
HLA-DOAP06340 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.62□□□□□ -1.35
HLA-DOAP06340 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
HLA-DOAP06340 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HLA-DOAP06340 AL592429.1-201ENST00000403909 1473 ntBASIC6.62□□□□□ -1.35
HLA-DOAP06340 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.62□□□□□ -1.35
HLA-DOAP06340 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
HLA-DOAP06340 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HLA-DOAP06340 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
HLA-DOAP06340 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HLA-DOAP06340 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.62□□□□□ -1.35
HLA-DOAP06340 OR4K17-201ENST00000315543 1032 ntBASIC6.62□□□□□ -1.35
HLA-DOAP06340 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HLA-DOAP06340 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
HLA-DOAP06340 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.62□□□□□ -1.35
HLA-DOAP06340 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
HLA-DOAP06340 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC6.62□□□□□ -1.35
HLA-DOAP06340 RNU6-584P-201ENST00000410350 95 ntBASIC6.62□□□□□ -1.35
HLA-DOAP06340 AC069282.1-201ENST00000411911 526 ntBASIC6.62□□□□□ -1.35
HLA-DOAP06340 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC6.62□□□□□ -1.35
HLA-DOAP06340 GTF2IP5-201ENST00000414608 731 ntBASIC6.62□□□□□ -1.35
HLA-DOAP06340 RNGTTP1-201ENST00000420965 728 ntBASIC6.62□□□□□ -1.35
HLA-DOAP06340 CYCSP6-201ENST00000434498 302 ntBASIC6.62□□□□□ -1.35
HLA-DOAP06340 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC6.62□□□□□ -1.35
HLA-DOAP06340 MORF4L1P4-201ENST00000450245 976 ntBASIC6.62□□□□□ -1.35
HLA-DOAP06340 CLIC4P1-201ENST00000453177 535 ntBASIC6.62□□□□□ -1.35
HLA-DOAP06340 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC6.62□□□□□ -1.35
HLA-DOAP06340 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HLA-DOAP06340 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC6.62□□□□□ -1.35
HLA-DOAP06340 ATG10-208ENST00000513634 618 ntTSL 2 BASIC6.62□□□□□ -1.35
HLA-DOAP06340 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC6.62□□□□□ -1.35
HLA-DOAP06340 IGLVIV-66-1-201ENST00000521832 460 ntBASIC6.62□□□□□ -1.35
HLA-DOAP06340 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
HLA-DOAP06340 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
HLA-DOAP06340 AL049838.1-201ENST00000563647 981 ntBASIC6.62□□□□□ -1.35
HLA-DOAP06340 AC027216.1-201ENST00000577726 685 ntBASIC6.62□□□□□ -1.35
HLA-DOAP06340 AC211433.2-201ENST00000608433 387 ntBASIC6.62□□□□□ -1.35
HLA-DOAP06340 MIR6719-201ENST00000622428 87 ntBASIC6.62□□□□□ -1.35
HLA-DOAP06340 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
HLA-DOAP06340 CCT5-215ENST00000625723 135 ntTSL 5 BASIC6.62□□□□□ -1.35
HLA-DOAP06340 WDR75-207ENST00000631047 270 ntTSL 5 BASIC6.62□□□□□ -1.35
HLA-DOAP06340 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
HLA-DOAP06340 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
HLA-DOAP06340 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC6.62□□□□□ -1.35
HLA-DOAP06340 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HLA-DOAP06340 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
HLA-DOAP06340 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HLA-DOAP06340 ZNF812P-201ENST00000457674 1694 ntBASIC6.61□□□□□ -1.35
HLA-DOAP06340 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HLA-DOAP06340 AL161912.4-201ENST00000623889 2468 ntBASIC6.61□□□□□ -1.35
HLA-DOAP06340 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC6.61□□□□□ -1.35
HLA-DOAP06340 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HLA-DOAP06340 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.61□□□□□ -1.35
HLA-DOAP06340 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.61□□□□□ -1.35
HLA-DOAP06340 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HLA-DOAP06340 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
HLA-DOAP06340 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HLA-DOAP06340 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
HLA-DOAP06340 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.61□□□□□ -1.35
HLA-DOAP06340 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HLA-DOAP06340 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
HLA-DOAP06340 RNU1-77P-201ENST00000390868 162 ntBASIC6.61□□□□□ -1.35
HLA-DOAP06340 AL009179.1-201ENST00000406085 265 ntBASIC6.61□□□□□ -1.35
HLA-DOAP06340 AL139039.2-201ENST00000407436 479 ntBASIC6.61□□□□□ -1.35
HLA-DOAP06340 RNU4-34P-201ENST00000410431 124 ntBASIC6.61□□□□□ -1.35
HLA-DOAP06340 RPL35AP24-201ENST00000413846 330 ntBASIC6.61□□□□□ -1.35
HLA-DOAP06340 VPS26BP1-201ENST00000417155 755 ntBASIC6.61□□□□□ -1.35
HLA-DOAP06340 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.61□□□□□ -1.35
HLA-DOAP06340 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HLA-DOAP06340 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC6.61□□□□□ -1.35
HLA-DOAP06340 RPL7L1P9-201ENST00000431298 745 ntBASIC6.61□□□□□ -1.35
HLA-DOAP06340 MRPL50P1-201ENST00000431951 384 ntBASIC6.61□□□□□ -1.35
HLA-DOAP06340 TMEM183AP1-205ENST00000432739 290 ntBASIC6.61□□□□□ -1.35
HLA-DOAP06340 C1DP3-201ENST00000455013 423 ntBASIC6.61□□□□□ -1.35
HLA-DOAP06340 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.61□□□□□ -1.35
HLA-DOAP06340 LARP7P4-201ENST00000481075 878 ntBASIC6.61□□□□□ -1.35
HLA-DOAP06340 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms