Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LDLRP01130 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LDLRP01130 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LDLRP01130 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LDLRP01130 RNU6-618P-201ENST00000363518 112 ntBASIC5.51□□□□□ -1.53
LDLRP01130 SNORA70.6-201ENST00000383934 134 ntBASIC5.51□□□□□ -1.53
LDLRP01130 MIR7-1-201ENST00000384871 110 ntBASIC5.51□□□□□ -1.53
LDLRP01130 SPTLC1P2-201ENST00000407089 121 ntBASIC5.51□□□□□ -1.53
LDLRP01130 GABARAPL3-201ENST00000412799 354 ntBASIC5.51□□□□□ -1.53
LDLRP01130 AC079809.1-201ENST00000415468 276 ntBASIC5.51□□□□□ -1.53
LDLRP01130 RPS7P8-201ENST00000418311 581 ntBASIC5.51□□□□□ -1.53
LDLRP01130 NIPA2P1-201ENST00000426223 976 ntBASIC5.51□□□□□ -1.53
LDLRP01130 BX323845.3-201ENST00000428215 527 ntBASIC5.51□□□□□ -1.53
LDLRP01130 DEFA9P-201ENST00000433042 285 ntBASIC5.51□□□□□ -1.53
LDLRP01130 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.51□□□□□ -1.53
LDLRP01130 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.51□□□□□ -1.53
LDLRP01130 SEPT14P12-201ENST00000442280 560 ntBASIC5.51□□□□□ -1.53
LDLRP01130 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.51□□□□□ -1.53
LDLRP01130 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.51□□□□□ -1.53
LDLRP01130 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.51□□□□□ -1.53
LDLRP01130 AC025181.1-201ENST00000477507 416 ntBASIC5.51□□□□□ -1.53
LDLRP01130 AC092865.4-201ENST00000477936 615 ntBASIC5.51□□□□□ -1.53
LDLRP01130 RPSAP51-201ENST00000497462 645 ntBASIC5.51□□□□□ -1.53
LDLRP01130 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.51□□□□□ -1.53
LDLRP01130 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.51□□□□□ -1.53
LDLRP01130 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.51□□□□□ -1.53
LDLRP01130 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.51□□□□□ -1.53
LDLRP01130 AC026688.1-201ENST00000520639 1168 ntBASIC5.51□□□□□ -1.53
LDLRP01130 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
LDLRP01130 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
LDLRP01130 AC044860.2-201ENST00000561005 179 ntBASIC5.51□□□□□ -1.53
LDLRP01130 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.51□□□□□ -1.53
LDLRP01130 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LDLRP01130 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.51□□□□□ -1.53
LDLRP01130 AC104695.2-201ENST00000605056 775 ntBASIC5.51□□□□□ -1.53
LDLRP01130 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.51□□□□□ -1.53
LDLRP01130 AL445670.1-201ENST00000618889 801 ntBASIC5.51□□□□□ -1.53
LDLRP01130 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.51□□□□□ -1.53
LDLRP01130 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.51□□□□□ -1.53
LDLRP01130 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
LDLRP01130 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
LDLRP01130 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
LDLRP01130 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.51□□□□□ -1.53
LDLRP01130 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
LDLRP01130 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LDLRP01130 CDC27P2-201ENST00000425026 1922 ntBASIC5.5□□□□□ -1.53
LDLRP01130 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LDLRP01130 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LDLRP01130 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
LDLRP01130 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
LDLRP01130 CUL4AP1-201ENST00000514750 1863 ntBASIC5.5□□□□□ -1.53
LDLRP01130 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
LDLRP01130 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC5.5□□□□□ -1.53
LDLRP01130 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LDLRP01130 RNA5SP156-201ENST00000410250 110 ntBASIC5.5□□□□□ -1.53
LDLRP01130 RNU4-34P-201ENST00000410431 124 ntBASIC5.5□□□□□ -1.53
LDLRP01130 AL096829.1-201ENST00000413677 457 ntBASIC5.5□□□□□ -1.53
LDLRP01130 AC093155.2-201ENST00000420734 937 ntBASIC5.5□□□□□ -1.53
LDLRP01130 RNGTTP1-201ENST00000420965 728 ntBASIC5.5□□□□□ -1.53
LDLRP01130 NMD3P2-201ENST00000421815 761 ntBASIC5.5□□□□□ -1.53
LDLRP01130 AL356806.1-201ENST00000422524 916 ntBASIC5.5□□□□□ -1.53
LDLRP01130 PRUNEP1-201ENST00000425846 705 ntBASIC5.5□□□□□ -1.53
LDLRP01130 RPS27P18-201ENST00000431701 247 ntBASIC5.5□□□□□ -1.53
LDLRP01130 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.5□□□□□ -1.53
LDLRP01130 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.5□□□□□ -1.53
LDLRP01130 AL663074.2-201ENST00000440621 479 ntBASIC5.5□□□□□ -1.53
LDLRP01130 RPL5P25-201ENST00000441148 775 ntBASIC5.5□□□□□ -1.53
LDLRP01130 CYCSP51-201ENST00000443545 318 ntBASIC5.5□□□□□ -1.53
LDLRP01130 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
LDLRP01130 AC104164.1-201ENST00000460282 590 ntBASIC5.5□□□□□ -1.53
LDLRP01130 AC083795.1-201ENST00000491760 320 ntBASIC5.5□□□□□ -1.53
LDLRP01130 AC231760.1-201ENST00000498002 260 ntBASIC5.5□□□□□ -1.53
LDLRP01130 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LDLRP01130 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC5.5□□□□□ -1.53
LDLRP01130 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.5□□□□□ -1.53
LDLRP01130 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.5□□□□□ -1.53
LDLRP01130 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.5□□□□□ -1.53
LDLRP01130 CYCSP22-201ENST00000517555 339 ntBASIC5.5□□□□□ -1.53
LDLRP01130 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
LDLRP01130 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LDLRP01130 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.5□□□□□ -1.53
LDLRP01130 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC5.5□□□□□ -1.53
LDLRP01130 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.5□□□□□ -1.53
LDLRP01130 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.5□□□□□ -1.53
LDLRP01130 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LDLRP01130 AC002069.2-201ENST00000603580 883 ntBASIC5.5□□□□□ -1.53
LDLRP01130 HIRAP1-201ENST00000605318 787 ntBASIC5.5□□□□□ -1.53
LDLRP01130 AC144521.1-201ENST00000607148 956 ntBASIC5.5□□□□□ -1.53
LDLRP01130 AL035661.1-201ENST00000620459 1144 ntBASIC5.5□□□□□ -1.53
LDLRP01130 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.5□□□□□ -1.53
LDLRP01130 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.5□□□□□ -1.53
LDLRP01130 OR8G3P-202ENST00000641572 1255 ntBASIC5.5□□□□□ -1.53
LDLRP01130 AP005432.1-201ENST00000580891 3485 ntBASIC5.5□□□□□ -1.53
LDLRP01130 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LDLRP01130 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
LDLRP01130 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LDLRP01130 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LDLRP01130 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
LDLRP01130 NEPNP-201ENST00000404786 1371 ntBASIC5.5□□□□□ -1.53
LDLRP01130 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms