Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC4.53□□□□□ -1.68
UPK1BO75841 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.53□□□□□ -1.68
UPK1BO75841 NPM1P23-201ENST00000440193 849 ntBASIC4.53□□□□□ -1.68
UPK1BO75841 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
UPK1BO75841 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.53□□□□□ -1.68
UPK1BO75841 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC4.53□□□□□ -1.68
UPK1BO75841 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
UPK1BO75841 AC091544.1-201ENST00000484702 348 ntBASIC4.53□□□□□ -1.68
UPK1BO75841 RN7SL57P-201ENST00000493687 290 ntBASIC4.53□□□□□ -1.68
UPK1BO75841 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.53□□□□□ -1.68
UPK1BO75841 AC074087.1-201ENST00000512059 724 ntBASIC4.53□□□□□ -1.68
UPK1BO75841 Vault.2-201ENST00000516519 98 ntBASIC4.53□□□□□ -1.68
UPK1BO75841 RNU6-943P-201ENST00000516960 98 ntBASIC4.53□□□□□ -1.68
UPK1BO75841 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC4.53□□□□□ -1.68
UPK1BO75841 AC125612.1-201ENST00000547580 377 ntBASIC4.53□□□□□ -1.68
UPK1BO75841 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC4.53□□□□□ -1.68
UPK1BO75841 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC4.53□□□□□ -1.68
UPK1BO75841 AL356752.1-201ENST00000615844 593 ntBASIC4.53□□□□□ -1.68
UPK1BO75841 AC009237.17-201ENST00000618111 748 ntBASIC4.53□□□□□ -1.68
UPK1BO75841 AC091059.2-201ENST00000623355 614 ntBASIC4.53□□□□□ -1.68
UPK1BO75841 AC068213.1-201ENST00000625124 226 ntBASIC4.53□□□□□ -1.68
UPK1BO75841 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC4.53□□□□□ -1.68
UPK1BO75841 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.53□□□□□ -1.68
UPK1BO75841 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
UPK1BO75841 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
UPK1BO75841 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
UPK1BO75841 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
UPK1BO75841 AC091046.3-201ENST00000631455 1574 ntBASIC4.53□□□□□ -1.69
UPK1BO75841 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
UPK1BO75841 TOPORSLP1-201ENST00000467693 2102 ntBASIC4.52□□□□□ -1.69
UPK1BO75841 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.52□□□□□ -1.69
UPK1BO75841 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.52□□□□□ -1.69
UPK1BO75841 RNA5SP433-201ENST00000364491 114 ntBASIC4.52□□□□□ -1.69
UPK1BO75841 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
UPK1BO75841 RNA5SP372-201ENST00000390836 115 ntBASIC4.52□□□□□ -1.69
UPK1BO75841 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
UPK1BO75841 AC003087.1-201ENST00000412828 499 ntTSL 3 BASIC4.52□□□□□ -1.69
UPK1BO75841 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC4.52□□□□□ -1.69
UPK1BO75841 OR2X1P-201ENST00000421144 687 ntBASIC4.52□□□□□ -1.69
UPK1BO75841 AL034379.1-201ENST00000423216 253 ntBASIC4.52□□□□□ -1.69
UPK1BO75841 AL390866.1-201ENST00000425137 469 ntTSL 5 BASIC4.52□□□□□ -1.69
UPK1BO75841 PRUNEP1-201ENST00000425846 705 ntBASIC4.52□□□□□ -1.69
UPK1BO75841 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.52□□□□□ -1.69
UPK1BO75841 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.52□□□□□ -1.69
UPK1BO75841 AC010086.1-201ENST00000437359 1052 ntBASIC4.52□□□□□ -1.69
UPK1BO75841 MRPL48P1-201ENST00000445390 636 ntBASIC4.52□□□□□ -1.69
UPK1BO75841 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.52□□□□□ -1.69
UPK1BO75841 RN7SL83P-201ENST00000468131 297 ntBASIC4.52□□□□□ -1.69
UPK1BO75841 RN7SL189P-201ENST00000468631 289 ntBASIC4.52□□□□□ -1.69
UPK1BO75841 RPSAP37-201ENST00000470913 821 ntBASIC4.52□□□□□ -1.69
UPK1BO75841 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC4.52□□□□□ -1.69
UPK1BO75841 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC4.52□□□□□ -1.69
UPK1BO75841 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.52□□□□□ -1.69
UPK1BO75841 AC132192.1-201ENST00000531111 597 ntTSL 3 BASIC4.52□□□□□ -1.69
UPK1BO75841 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC4.52□□□□□ -1.69
UPK1BO75841 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.52□□□□□ -1.69
UPK1BO75841 STARD6-204ENST00000584040 660 ntTSL 3 BASIC4.52□□□□□ -1.69
UPK1BO75841 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC4.52□□□□□ -1.69
UPK1BO75841 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.52□□□□□ -1.69
UPK1BO75841 RPL26P30-202ENST00000602923 645 ntBASIC4.52□□□□□ -1.69
UPK1BO75841 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC4.52□□□□□ -1.69
UPK1BO75841 AC009597.2-201ENST00000604659 592 ntBASIC4.52□□□□□ -1.69
UPK1BO75841 AL162431.4-201ENST00000604674 411 ntBASIC4.52□□□□□ -1.69
UPK1BO75841 AC026979.4-201ENST00000606555 645 ntBASIC4.52□□□□□ -1.69
UPK1BO75841 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC4.52□□□□□ -1.69
UPK1BO75841 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC4.52□□□□□ -1.69
UPK1BO75841 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC4.52□□□□□ -1.69
UPK1BO75841 AC140113.4-201ENST00000622087 222 ntBASIC4.52□□□□□ -1.69
UPK1BO75841 AL136228.1-201ENST00000622221 319 ntBASIC4.52□□□□□ -1.69
UPK1BO75841 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
UPK1BO75841 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.52□□□□□ -1.69
UPK1BO75841 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
UPK1BO75841 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
UPK1BO75841 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.52□□□□□ -1.69
UPK1BO75841 HCFC2P1-201ENST00000392864 1592 ntBASIC4.52□□□□□ -1.69
UPK1BO75841 AC017104.4-201ENST00000636283 1592 ntBASIC4.52□□□□□ -1.69
UPK1BO75841 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
UPK1BO75841 AC008627.1-201ENST00000517511 1704 ntBASIC4.52□□□□□ -1.69
UPK1BO75841 MTCO1P22-201ENST00000604619 1360 ntBASIC4.52□□□□□ -1.69
UPK1BO75841 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
UPK1BO75841 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.51□□□□□ -1.69
UPK1BO75841 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.51□□□□□ -1.69
UPK1BO75841 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.51□□□□□ -1.69
UPK1BO75841 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
UPK1BO75841 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
UPK1BO75841 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC4.51□□□□□ -1.69
UPK1BO75841 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC4.51□□□□□ -1.69
UPK1BO75841 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
UPK1BO75841 MIR195-201ENST00000385194 87 ntBASIC4.51□□□□□ -1.69
UPK1BO75841 AC004448.2-201ENST00000422360 586 ntBASIC4.51□□□□□ -1.69
UPK1BO75841 AC113412.1-201ENST00000425840 504 ntBASIC4.51□□□□□ -1.69
UPK1BO75841 AC007790.1-201ENST00000439081 782 ntBASIC4.51□□□□□ -1.69
UPK1BO75841 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
UPK1BO75841 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.51□□□□□ -1.69
UPK1BO75841 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
UPK1BO75841 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC4.51□□□□□ -1.69
UPK1BO75841 NREP-217ENST00000509025 987 ntTSL 3 BASIC4.51□□□□□ -1.69
UPK1BO75841 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
UPK1BO75841 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC4.51□□□□□ -1.69
UPK1BO75841 NREP-223ENST00000515855 801 ntTSL 4 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms