Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 RN7SKP229-201ENST00000410465 302 ntBASIC5.22□□□□□ -1.57
SSX4O60224 HYALP1-201ENST00000417674 1279 ntBASIC5.22□□□□□ -1.57
SSX4O60224 PTP4A1P1-201ENST00000420539 515 ntBASIC5.22□□□□□ -1.57
SSX4O60224 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC5.22□□□□□ -1.57
SSX4O60224 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.22□□□□□ -1.57
SSX4O60224 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.22□□□□□ -1.57
SSX4O60224 RPS26P4-201ENST00000431743 355 ntBASIC5.22□□□□□ -1.57
SSX4O60224 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.22□□□□□ -1.57
SSX4O60224 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SSX4O60224 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.22□□□□□ -1.57
SSX4O60224 AC245517.2-201ENST00000442890 346 ntBASIC5.22□□□□□ -1.57
SSX4O60224 AL627224.1-201ENST00000448334 444 ntBASIC5.22□□□□□ -1.57
SSX4O60224 AC005077.1-201ENST00000449226 375 ntBASIC5.22□□□□□ -1.57
SSX4O60224 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.22□□□□□ -1.57
SSX4O60224 MTND2P30-201ENST00000456663 382 ntBASIC5.22□□□□□ -1.57
SSX4O60224 AC015864.1-201ENST00000496512 544 ntBASIC5.22□□□□□ -1.57
SSX4O60224 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SSX4O60224 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.22□□□□□ -1.57
SSX4O60224 AC021087.2-201ENST00000504656 1203 ntBASIC5.22□□□□□ -1.57
SSX4O60224 AC008628.1-201ENST00000508663 265 ntBASIC5.22□□□□□ -1.57
SSX4O60224 AC093770.1-201ENST00000511559 571 ntBASIC5.22□□□□□ -1.57
SSX4O60224 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.22□□□□□ -1.57
SSX4O60224 AC138832.1-201ENST00000522871 556 ntBASIC5.22□□□□□ -1.57
SSX4O60224 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
SSX4O60224 AP001858.2-201ENST00000536213 601 ntBASIC5.22□□□□□ -1.57
SSX4O60224 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
SSX4O60224 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.22□□□□□ -1.57
SSX4O60224 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
SSX4O60224 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.22□□□□□ -1.57
SSX4O60224 AC090236.2-201ENST00000587933 1101 ntBASIC5.22□□□□□ -1.57
SSX4O60224 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.22□□□□□ -1.57
SSX4O60224 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.22□□□□□ -1.57
SSX4O60224 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.22□□□□□ -1.57
SSX4O60224 AC027243.2-201ENST00000602530 724 ntBASIC5.22□□□□□ -1.57
SSX4O60224 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.22□□□□□ -1.57
SSX4O60224 AL671309.1-201ENST00000603750 544 ntBASIC5.22□□□□□ -1.57
SSX4O60224 AC005014.3-201ENST00000605985 190 ntBASIC5.22□□□□□ -1.57
SSX4O60224 AC005021.1-201ENST00000608730 355 ntBASIC5.22□□□□□ -1.57
SSX4O60224 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
SSX4O60224 AL137067.2-201ENST00000621202 131 ntBASIC5.22□□□□□ -1.57
SSX4O60224 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.22□□□□□ -1.57
SSX4O60224 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.22□□□□□ -1.57
SSX4O60224 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.22□□□□□ -1.57
SSX4O60224 OR5AC4P-202ENST00000642086 985 ntBASIC5.22□□□□□ -1.57
SSX4O60224 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SSX4O60224 AC073136.1-201ENST00000449426 2884 ntBASIC5.22□□□□□ -1.57
SSX4O60224 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SSX4O60224 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
SSX4O60224 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.22□□□□□ -1.57
SSX4O60224 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
SSX4O60224 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SSX4O60224 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SSX4O60224 PSG10P-201ENST00000501199 1500 ntBASIC5.22□□□□□ -1.57
SSX4O60224 AC017002.4-201ENST00000604721 1525 ntBASIC5.22□□□□□ -1.57
SSX4O60224 AP001002.1-201ENST00000625148 1513 ntBASIC5.22□□□□□ -1.57
SSX4O60224 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
SSX4O60224 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.22□□□□□ -1.57
SSX4O60224 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SSX4O60224 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SSX4O60224 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
SSX4O60224 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
SSX4O60224 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.21□□□□□ -1.58
SSX4O60224 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
SSX4O60224 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SSX4O60224 AC092376.2-201ENST00000622621 4116 ntBASIC5.21□□□□□ -1.58
SSX4O60224 TCP11X1-202ENST00000622971 1372 ntBASIC5.21□□□□□ -1.58
SSX4O60224 AC133552.1-201ENST00000569988 4007 ntBASIC5.21□□□□□ -1.58
SSX4O60224 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.21□□□□□ -1.58
SSX4O60224 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SSX4O60224 OR52B3P-201ENST00000314715 928 ntBASIC5.21□□□□□ -1.58
SSX4O60224 SNORD115-48-201ENST00000364764 76 ntBASIC5.21□□□□□ -1.58
SSX4O60224 RNA5SP105-201ENST00000391123 113 ntBASIC5.21□□□□□ -1.58
SSX4O60224 GSTA12P-201ENST00000402398 508 ntBASIC5.21□□□□□ -1.58
SSX4O60224 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.21□□□□□ -1.58
SSX4O60224 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC5.21□□□□□ -1.58
SSX4O60224 PTCD2P2-201ENST00000415579 1095 ntBASIC5.21□□□□□ -1.58
SSX4O60224 MTCYBP7-201ENST00000419540 1134 ntBASIC5.21□□□□□ -1.58
SSX4O60224 CHEK2P5-201ENST00000423877 246 ntBASIC5.21□□□□□ -1.58
SSX4O60224 MTND6P12-201ENST00000428247 522 ntBASIC5.21□□□□□ -1.58
SSX4O60224 AC023141.6-201ENST00000429418 337 ntBASIC5.21□□□□□ -1.58
SSX4O60224 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.21□□□□□ -1.58
SSX4O60224 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.21□□□□□ -1.58
SSX4O60224 AL161636.2-201ENST00000445179 927 ntBASIC5.21□□□□□ -1.58
SSX4O60224 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.21□□□□□ -1.58
SSX4O60224 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC5.21□□□□□ -1.58
SSX4O60224 SEPT7P3-201ENST00000455017 621 ntBASIC5.21□□□□□ -1.58
SSX4O60224 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SSX4O60224 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SSX4O60224 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC5.21□□□□□ -1.58
SSX4O60224 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.21□□□□□ -1.58
SSX4O60224 RNA5SP230-201ENST00000517039 122 ntBASIC5.21□□□□□ -1.58
SSX4O60224 AC020937.1-201ENST00000519677 1013 ntBASIC5.21□□□□□ -1.58
SSX4O60224 AC112191.2-201ENST00000522428 333 ntBASIC5.21□□□□□ -1.58
SSX4O60224 OR4A43P-201ENST00000532938 908 ntBASIC5.21□□□□□ -1.58
SSX4O60224 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC5.21□□□□□ -1.58
SSX4O60224 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.21□□□□□ -1.58
SSX4O60224 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.21□□□□□ -1.58
SSX4O60224 MTND4LP25-201ENST00000570218 163 ntBASIC5.21□□□□□ -1.58
SSX4O60224 AC090079.2-201ENST00000575289 768 ntBASIC5.21□□□□□ -1.58
SSX4O60224 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms