Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 SUGT1P2-201ENST00000379452 992 ntBASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 Z86062.1-201ENST00000406773 777 ntBASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 RANP4-201ENST00000413361 655 ntBASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 AC245517.2-201ENST00000442890 346 ntBASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 TVP23BP2-201ENST00000455082 615 ntBASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 MTND2P6-201ENST00000455337 1030 ntBASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 AC104629.2-201ENST00000468627 598 ntBASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 RN7SL583P-201ENST00000475692 287 ntBASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 AP002884.1-201ENST00000479691 655 ntBASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 AC093801.2-201ENST00000503966 1050 ntBASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 AC105420.1-201ENST00000504389 582 ntBASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 AC091912.1-201ENST00000511351 248 ntBASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 MRPS16P1-201ENST00000523462 412 ntBASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 MIR6780B-201ENST00000610307 79 ntBASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 AC005156.1-201ENST00000613371 573 ntBASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 AC095038.2-201ENST00000621464 1070 ntBASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 AC068880.4-201ENST00000623082 495 ntBASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 AC073592.6-201ENST00000624271 415 ntBASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 OR8G3P-202ENST00000641572 1255 ntBASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TCRBV7S3A2A0A539 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 AC004656.1-201ENST00000568479 4951 ntBASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 MTCO1P4-201ENST00000520516 1409 ntBASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 AL078595.2-201ENST00000605309 1780 ntBASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 AL009179.1-201ENST00000406085 265 ntBASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 AK4P4-201ENST00000419465 646 ntBASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 AC009506.2-201ENST00000420635 840 ntBASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 AL035660.1-201ENST00000422041 222 ntBASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 AC007161.1-204ENST00000423039 460 ntBASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 RIMKLBP2-201ENST00000424737 654 ntBASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 RPL7P56-201ENST00000429441 717 ntBASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 AC069154.1-201ENST00000432914 542 ntBASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 AC007563.3-201ENST00000433233 371 ntBASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 MOB1AP2-201ENST00000446060 614 ntBASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 AC005165.2-201ENST00000466070 380 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms