Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AL358876.1-201ENST00000453364 1075 ntBASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 RN7SL57P-201ENST00000493687 290 ntBASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 MYL12BP2-201ENST00000503948 512 ntBASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 AC021106.1-201ENST00000509020 1058 ntBASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 PRMT5P1-201ENST00000514351 598 ntBASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 AC092709.1-201ENST00000521355 1045 ntBASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 TRIM51DP-201ENST00000529746 596 ntBASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 AC022882.1-201ENST00000532142 501 ntBASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 AC092332.1-201ENST00000563684 829 ntBASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 AC012368.3-201ENST00000604190 219 ntBASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 AL008729.2-201ENST00000606393 473 ntBASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 AC083964.1-201ENST00000607549 630 ntBASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 MIR6070-201ENST00000613967 103 ntBASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 ADAM5-202ENST00000399789 1942 ntBASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 PWAR1-201ENST00000624188 2414 ntBASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 AL034549.2-201ENST00000618285 3373 ntBASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 RNU1-19P-201ENST00000363306 165 ntBASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 SNORA64.3-201ENST00000365647 134 ntBASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 RNU6-729P-201ENST00000384399 107 ntBASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 ZNF37CP-201ENST00000406795 241 ntBASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 SNORA79B-201ENST00000410557 148 ntBASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 AL357752.1-201ENST00000412817 349 ntBASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 RCC2P2-201ENST00000422174 918 ntBASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 AC099782.1-201ENST00000425889 474 ntBASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 AC023141.3-201ENST00000436698 278 ntBASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 AC021678.3-201ENST00000517893 476 ntBASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 TRIM51GP-201ENST00000534741 1350 ntBASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 CASC22-201ENST00000569713 386 ntTSL 5 BASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 AP005119.1-201ENST00000580956 292 ntBASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 AC138473.1-201ENST00000605717 526 ntBASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 MAPK10-320ENST00000641462 6696 ntBASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 STX3-208ENST00000641815 3236 ntBASIC4.59□□□□□ -1.67
KCNIP3Q9Y2W7 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
KCNIP3Q9Y2W7 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.59□□□□□ -1.68
KCNIP3Q9Y2W7 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.58□□□□□ -1.68
KCNIP3Q9Y2W7 Z95327.2-201ENST00000414579 1873 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms