Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 AL445231.1-201ENST00000445523 1814 ntTSL 2 BASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 TRIM59-208ENST00000543469 4615 ntTSL 5 BASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 AC079949.2-201ENST00000617117 2933 ntBASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 MMP20-201ENST00000260228 1956 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 ZNF577-201ENST00000301399 3074 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 IGKV7-3-201ENST00000357453 298 ntBASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 SNORA10B-201ENST00000384458 133 ntBASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 SNORA70I-201ENST00000384544 135 ntBASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 RNA5SP177-201ENST00000410122 107 ntBASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 RPL23AP19-201ENST00000436229 369 ntBASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 RPL38P1-201ENST00000460914 211 ntBASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 AC015724.1-201ENST00000478577 156 ntBASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 AL445187.1-201ENST00000502685 260 ntBASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 AC079768.1-201ENST00000503181 711 ntBASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 KLRA1P-201ENST00000503499 986 ntBASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 MRPL57P6-201ENST00000506570 309 ntBASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 SNORA48.10-201ENST00000516965 160 ntBASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 OR7E96P-201ENST00000530816 976 ntBASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 AC013828.2-201ENST00000532487 235 ntBASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 AL845331.3-202ENST00000562856 261 ntBASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 MIR4307-201ENST00000582802 84 ntBASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 AC008655.2-201ENST00000597049 304 ntTSL 4 BASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 RPL12P25-202ENST00000598100 674 ntBASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 AC104785.1-201ENST00000603220 588 ntBASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 Z95327.3-201ENST00000610385 572 ntBASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 ACACA-232ENST00000614438 569 ntTSL 2 BASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 AC129778.1-202ENST00000623812 261 ntBASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 AC026336.5-201ENST00000624455 738 ntBASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 TSHZ2-205ENST00000626626 670 ntBASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 AL591379.1-207ENST00000635982 261 ntBASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 AMYH02020865.1-205ENST00000636189 261 ntBASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 BCL2L11-224ENST00000639340 243 ntTSL 5 BASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 B3GALT5-202ENST00000380618 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 LRRC37A9P-201ENST00000603850 5376 ntBASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 LINC02128-205ENST00000641755 1334 ntBASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 ERAP2-201ENST00000379904 3219 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 GLS2-215ENST00000539272 2174 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 OR4G11P-202ENST00000642116 1414 ntBASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 LINC02111-201ENST00000505158 2312 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 TXNRD1-219ENST00000529546 2018 ntTSL 2 BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 AL121950.1-201ENST00000624993 2077 ntBASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 OFD1P5Y-201ENST00000447585 2590 ntBASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 CREM-208ENST00000361599 2170 ntTSL 5 BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 HYDIN2-203ENST00000614586 13885 ntBASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 AL078621.1-201ENST00000272567 768 ntBASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 RN7SKP63-201ENST00000363187 301 ntBASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 RNU6-809P-201ENST00000384461 107 ntBASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 PEX12P1-201ENST00000400284 1048 ntBASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 RN7SKP221-201ENST00000410420 301 ntBASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 RN7SKP131-201ENST00000410698 301 ntBASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 RNU2-18P-201ENST00000411224 162 ntBASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 AC074117.1-203ENST00000412749 399 ntTSL 3 BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC7.93□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms