Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC8.11□□□□□ -1.11
USP35Q9P2H5 GEMIN2P1-201ENST00000454246 752 ntBASIC8.11□□□□□ -1.11
USP35Q9P2H5 snoU13.29-201ENST00000459370 104 ntBASIC8.11□□□□□ -1.11
USP35Q9P2H5 RN7SL826P-201ENST00000479724 288 ntBASIC8.11□□□□□ -1.11
USP35Q9P2H5 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC8.11□□□□□ -1.11
USP35Q9P2H5 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
USP35Q9P2H5 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC8.11□□□□□ -1.11
USP35Q9P2H5 UBTFL9-201ENST00000534504 1148 ntBASIC8.11□□□□□ -1.11
USP35Q9P2H5 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC8.11□□□□□ -1.11
USP35Q9P2H5 AL356801.1-201ENST00000559320 294 ntBASIC8.11□□□□□ -1.11
USP35Q9P2H5 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC8.11□□□□□ -1.11
USP35Q9P2H5 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC8.11□□□□□ -1.11
USP35Q9P2H5 AF230666.2-201ENST00000602328 725 ntBASIC8.11□□□□□ -1.11
USP35Q9P2H5 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC8.11□□□□□ -1.11
USP35Q9P2H5 HOTTIP_3.1-201ENST00000619957 337 ntBASIC8.11□□□□□ -1.11
USP35Q9P2H5 AL357562.1-201ENST00000624911 609 ntBASIC8.11□□□□□ -1.11
USP35Q9P2H5 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC8.11□□□□□ -1.11
USP35Q9P2H5 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
USP35Q9P2H5 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
USP35Q9P2H5 GUCY1B2-204ENST00000531898 1979 ntBASIC8.11□□□□□ -1.11
USP35Q9P2H5 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC8.11□□□□□ -1.11
USP35Q9P2H5 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
USP35Q9P2H5 AC140134.1-201ENST00000511830 3544 ntBASIC8.11□□□□□ -1.11
USP35Q9P2H5 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
USP35Q9P2H5 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
USP35Q9P2H5 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
USP35Q9P2H5 SNORA43.1-201ENST00000364863 140 ntBASIC8.1□□□□□ -1.11
USP35Q9P2H5 MIR585-201ENST00000384887 94 ntBASIC8.1□□□□□ -1.11
USP35Q9P2H5 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
USP35Q9P2H5 GAS5-202ENST00000414075 413 ntTSL 2 BASIC8.1□□□□□ -1.11
USP35Q9P2H5 AC092570.3-201ENST00000420113 693 ntBASIC8.1□□□□□ -1.11
USP35Q9P2H5 NME1P1-201ENST00000420914 382 ntBASIC8.1□□□□□ -1.11
USP35Q9P2H5 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC8.1□□□□□ -1.11
USP35Q9P2H5 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC8.1□□□□□ -1.11
USP35Q9P2H5 AL662874.1-201ENST00000426065 230 ntBASIC8.1□□□□□ -1.11
USP35Q9P2H5 AC127526.2-201ENST00000426436 775 ntBASIC8.1□□□□□ -1.11
USP35Q9P2H5 AL512637.2-201ENST00000431287 1256 ntBASIC8.1□□□□□ -1.11
USP35Q9P2H5 HSFY7P-201ENST00000432672 318 ntBASIC8.1□□□□□ -1.11
USP35Q9P2H5 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC8.1□□□□□ -1.11
USP35Q9P2H5 HSFY8P-201ENST00000437934 318 ntBASIC8.1□□□□□ -1.11
USP35Q9P2H5 ZNF736P11Y-201ENST00000442535 1213 ntBASIC8.1□□□□□ -1.11
USP35Q9P2H5 ZNF736P12Y-201ENST00000443152 1243 ntBASIC8.1□□□□□ -1.11
USP35Q9P2H5 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC8.1□□□□□ -1.11
USP35Q9P2H5 HSFY5P-201ENST00000453726 309 ntBASIC8.1□□□□□ -1.11
USP35Q9P2H5 ZNF736P4Y-201ENST00000454995 1243 ntBASIC8.1□□□□□ -1.11
USP35Q9P2H5 RN7SL184P-201ENST00000488308 297 ntBASIC8.1□□□□□ -1.11
USP35Q9P2H5 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC8.1□□□□□ -1.11
USP35Q9P2H5 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC8.1□□□□□ -1.11
USP35Q9P2H5 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC8.1□□□□□ -1.11
USP35Q9P2H5 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
USP35Q9P2H5 EIF4A2P5-201ENST00000529914 499 ntBASIC8.1□□□□□ -1.11
USP35Q9P2H5 CASP1-216ENST00000534497 825 ntTSL 5 BASIC8.1□□□□□ -1.11
USP35Q9P2H5 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC8.1□□□□□ -1.11
USP35Q9P2H5 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC8.1□□□□□ -1.11
USP35Q9P2H5 AC009120.3-201ENST00000563335 499 ntBASIC8.1□□□□□ -1.11
USP35Q9P2H5 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
USP35Q9P2H5 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
USP35Q9P2H5 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC8.1□□□□□ -1.11
USP35Q9P2H5 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
USP35Q9P2H5 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
USP35Q9P2H5 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC8.1□□□□□ -1.11
USP35Q9P2H5 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
USP35Q9P2H5 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
USP35Q9P2H5 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
USP35Q9P2H5 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
USP35Q9P2H5 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
USP35Q9P2H5 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC8.09□□□□□ -1.11
USP35Q9P2H5 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
USP35Q9P2H5 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC8.09□□□□□ -1.11
USP35Q9P2H5 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC8.09□□□□□ -1.11
USP35Q9P2H5 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
USP35Q9P2H5 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
USP35Q9P2H5 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
USP35Q9P2H5 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
USP35Q9P2H5 AC005332.9-201ENST00000620266 2921 ntBASIC8.09□□□□□ -1.11
USP35Q9P2H5 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
USP35Q9P2H5 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC8.09□□□□□ -1.11
USP35Q9P2H5 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
USP35Q9P2H5 RNA5SP46-201ENST00000362370 120 ntBASIC8.09□□□□□ -1.11
USP35Q9P2H5 RNA5SP375-201ENST00000362975 119 ntBASIC8.09□□□□□ -1.11
USP35Q9P2H5 RNA5SP394-201ENST00000364216 119 ntBASIC8.09□□□□□ -1.11
USP35Q9P2H5 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
USP35Q9P2H5 AL445238.1-204ENST00000400311 463 ntBASIC8.09□□□□□ -1.11
USP35Q9P2H5 RNU4-74P-201ENST00000411280 161 ntBASIC8.09□□□□□ -1.11
USP35Q9P2H5 AL606495.1-201ENST00000422100 813 ntBASIC8.09□□□□□ -1.11
USP35Q9P2H5 RPS27P18-201ENST00000431701 247 ntBASIC8.09□□□□□ -1.11
USP35Q9P2H5 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC8.09□□□□□ -1.11
USP35Q9P2H5 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
USP35Q9P2H5 HAUS1P1-201ENST00000505275 832 ntBASIC8.09□□□□□ -1.11
USP35Q9P2H5 AC138866.2-201ENST00000508650 584 ntBASIC8.09□□□□□ -1.11
USP35Q9P2H5 MTHFD2P4-201ENST00000515074 1025 ntBASIC8.09□□□□□ -1.11
USP35Q9P2H5 APPL2-203ENST00000546731 684 ntTSL 2 BASIC8.09□□□□□ -1.11
USP35Q9P2H5 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC8.09□□□□□ -1.11
USP35Q9P2H5 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC8.09□□□□□ -1.11
USP35Q9P2H5 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC8.09□□□□□ -1.11
USP35Q9P2H5 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC8.09□□□□□ -1.11
USP35Q9P2H5 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC8.09□□□□□ -1.11
USP35Q9P2H5 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC8.09□□□□□ -1.11
USP35Q9P2H5 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC8.09□□□□□ -1.11
USP35Q9P2H5 BNIP3P27-201ENST00000599991 412 ntBASIC8.09□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms