Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.72□□□□□ -1.49
PCDH9Q9HC56 MTCO3P43-201ENST00000440974 771 ntBASIC5.72□□□□□ -1.49
PCDH9Q9HC56 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.72□□□□□ -1.49
PCDH9Q9HC56 AL358876.1-201ENST00000453364 1075 ntBASIC5.72□□□□□ -1.49
PCDH9Q9HC56 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.72□□□□□ -1.49
PCDH9Q9HC56 CYCSP53-201ENST00000455540 265 ntBASIC5.72□□□□□ -1.49
PCDH9Q9HC56 RPL12P24-201ENST00000474907 486 ntBASIC5.72□□□□□ -1.49
PCDH9Q9HC56 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.72□□□□□ -1.49
PCDH9Q9HC56 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PCDH9Q9HC56 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.72□□□□□ -1.49
PCDH9Q9HC56 SNORA70.17-201ENST00000516449 133 ntBASIC5.72□□□□□ -1.49
PCDH9Q9HC56 SNORA43.3-201ENST00000517240 103 ntBASIC5.72□□□□□ -1.49
PCDH9Q9HC56 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC5.72□□□□□ -1.49
PCDH9Q9HC56 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC5.72□□□□□ -1.49
PCDH9Q9HC56 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.72□□□□□ -1.49
PCDH9Q9HC56 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.72□□□□□ -1.49
PCDH9Q9HC56 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.72□□□□□ -1.49
PCDH9Q9HC56 IGBP1P1-201ENST00000554337 1009 ntBASIC5.72□□□□□ -1.49
PCDH9Q9HC56 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.72□□□□□ -1.49
PCDH9Q9HC56 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.72□□□□□ -1.49
PCDH9Q9HC56 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.72□□□□□ -1.49
PCDH9Q9HC56 AC020915.5-201ENST00000596836 964 ntBASIC5.72□□□□□ -1.49
PCDH9Q9HC56 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.72□□□□□ -1.49
PCDH9Q9HC56 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.72□□□□□ -1.49
PCDH9Q9HC56 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PCDH9Q9HC56 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.72□□□□□ -1.49
PCDH9Q9HC56 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.72□□□□□ -1.49
PCDH9Q9HC56 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.72□□□□□ -1.49
PCDH9Q9HC56 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
PCDH9Q9HC56 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
PCDH9Q9HC56 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
PCDH9Q9HC56 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.72□□□□□ -1.49
PCDH9Q9HC56 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PCDH9Q9HC56 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
PCDH9Q9HC56 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.72□□□□□ -1.49
PCDH9Q9HC56 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
PCDH9Q9HC56 MT-RNR2-201ENST00000387347 1559 ntBASIC5.72□□□□□ -1.49
PCDH9Q9HC56 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
PCDH9Q9HC56 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.71□□□□□ -1.49
PCDH9Q9HC56 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
PCDH9Q9HC56 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
PCDH9Q9HC56 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.71□□□□□ -1.5
PCDH9Q9HC56 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
PCDH9Q9HC56 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PCDH9Q9HC56 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.71□□□□□ -1.5
PCDH9Q9HC56 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
PCDH9Q9HC56 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PCDH9Q9HC56 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.71□□□□□ -1.5
PCDH9Q9HC56 AL009179.1-201ENST00000406085 265 ntBASIC5.71□□□□□ -1.5
PCDH9Q9HC56 RNU6-564P-201ENST00000410983 104 ntBASIC5.71□□□□□ -1.5
PCDH9Q9HC56 GABARAPL3-201ENST00000412799 354 ntBASIC5.71□□□□□ -1.5
PCDH9Q9HC56 RPSAP35-201ENST00000413753 818 ntBASIC5.71□□□□□ -1.5
PCDH9Q9HC56 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.71□□□□□ -1.5
PCDH9Q9HC56 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.71□□□□□ -1.5
PCDH9Q9HC56 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.71□□□□□ -1.5
PCDH9Q9HC56 AC013268.2-201ENST00000420753 337 ntBASIC5.71□□□□□ -1.5
PCDH9Q9HC56 RPL34P3-201ENST00000421454 338 ntBASIC5.71□□□□□ -1.5
PCDH9Q9HC56 AC007064.3-201ENST00000422608 359 ntBASIC5.71□□□□□ -1.5
PCDH9Q9HC56 AC007161.1-204ENST00000423039 460 ntBASIC5.71□□□□□ -1.5
PCDH9Q9HC56 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.71□□□□□ -1.5
PCDH9Q9HC56 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.71□□□□□ -1.5
PCDH9Q9HC56 AC006335.2-201ENST00000437993 330 ntBASIC5.71□□□□□ -1.5
PCDH9Q9HC56 RPL5P25-201ENST00000441148 775 ntBASIC5.71□□□□□ -1.5
PCDH9Q9HC56 AC005297.1-201ENST00000444765 862 ntBASIC5.71□□□□□ -1.5
PCDH9Q9HC56 AC090602.1-201ENST00000469695 252 ntBASIC5.71□□□□□ -1.5
PCDH9Q9HC56 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.71□□□□□ -1.5
PCDH9Q9HC56 AC093827.1-201ENST00000480094 861 ntBASIC5.71□□□□□ -1.5
PCDH9Q9HC56 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.71□□□□□ -1.5
PCDH9Q9HC56 DEFB109A-201ENST00000482450 265 ntBASIC5.71□□□□□ -1.5
PCDH9Q9HC56 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.71□□□□□ -1.5
PCDH9Q9HC56 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.71□□□□□ -1.5
PCDH9Q9HC56 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.71□□□□□ -1.5
PCDH9Q9HC56 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.71□□□□□ -1.5
PCDH9Q9HC56 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.71□□□□□ -1.5
PCDH9Q9HC56 AC011270.1-201ENST00000558606 583 ntBASIC5.71□□□□□ -1.5
PCDH9Q9HC56 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.71□□□□□ -1.5
PCDH9Q9HC56 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.71□□□□□ -1.5
PCDH9Q9HC56 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.71□□□□□ -1.5
PCDH9Q9HC56 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.71□□□□□ -1.5
PCDH9Q9HC56 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.71□□□□□ -1.5
PCDH9Q9HC56 ADAD1P2-201ENST00000588476 646 ntBASIC5.71□□□□□ -1.5
PCDH9Q9HC56 AC008521.2-201ENST00000591021 259 ntBASIC5.71□□□□□ -1.5
PCDH9Q9HC56 AL713998.2-201ENST00000604538 1198 ntBASIC5.71□□□□□ -1.5
PCDH9Q9HC56 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.71□□□□□ -1.5
PCDH9Q9HC56 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.71□□□□□ -1.5
PCDH9Q9HC56 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
PCDH9Q9HC56 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.71□□□□□ -1.5
PCDH9Q9HC56 BRAFP1-201ENST00000445336 2703 ntBASIC5.71□□□□□ -1.5
PCDH9Q9HC56 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PCDH9Q9HC56 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
PCDH9Q9HC56 AC100757.1-201ENST00000616872 1835 ntBASIC5.71□□□□□ -1.5
PCDH9Q9HC56 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PCDH9Q9HC56 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
PCDH9Q9HC56 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PCDH9Q9HC56 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.71□□□□□ -1.5
PCDH9Q9HC56 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
PCDH9Q9HC56 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
PCDH9Q9HC56 SRRM1P3-201ENST00000426911 2678 ntBASIC5.71□□□□□ -1.5
PCDH9Q9HC56 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.7□□□□□ -1.5
PCDH9Q9HC56 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms