Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC6.5□□□□□ -1.37
UPF2Q9HAU5 NPM1P40-201ENST00000412758 733 ntBASIC6.5□□□□□ -1.37
UPF2Q9HAU5 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC6.5□□□□□ -1.37
UPF2Q9HAU5 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC6.5□□□□□ -1.37
UPF2Q9HAU5 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.5□□□□□ -1.37
UPF2Q9HAU5 AC127526.2-201ENST00000426436 775 ntBASIC6.5□□□□□ -1.37
UPF2Q9HAU5 AL450996.1-201ENST00000445574 1202 ntBASIC6.5□□□□□ -1.37
UPF2Q9HAU5 AC073909.1-201ENST00000447112 999 ntBASIC6.5□□□□□ -1.37
UPF2Q9HAU5 RN7SL814P-201ENST00000487715 300 ntBASIC6.5□□□□□ -1.37
UPF2Q9HAU5 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.5□□□□□ -1.37
UPF2Q9HAU5 ASNSP4-201ENST00000511103 447 ntBASIC6.5□□□□□ -1.37
UPF2Q9HAU5 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.5□□□□□ -1.37
UPF2Q9HAU5 BCAS2P1-201ENST00000528022 632 ntBASIC6.5□□□□□ -1.37
UPF2Q9HAU5 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.5□□□□□ -1.37
UPF2Q9HAU5 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC6.5□□□□□ -1.37
UPF2Q9HAU5 MRPS21P7-201ENST00000566937 238 ntBASIC6.5□□□□□ -1.37
UPF2Q9HAU5 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.5□□□□□ -1.37
UPF2Q9HAU5 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.5□□□□□ -1.37
UPF2Q9HAU5 GMFG-202ENST00000594700 397 ntTSL 2 BASIC6.5□□□□□ -1.37
UPF2Q9HAU5 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.5□□□□□ -1.37
UPF2Q9HAU5 AL353796.1-201ENST00000561542 3241 ntBASIC6.5□□□□□ -1.37
UPF2Q9HAU5 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
UPF2Q9HAU5 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
UPF2Q9HAU5 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
UPF2Q9HAU5 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC6.5□□□□□ -1.37
UPF2Q9HAU5 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
UPF2Q9HAU5 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
UPF2Q9HAU5 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
UPF2Q9HAU5 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
UPF2Q9HAU5 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
UPF2Q9HAU5 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
UPF2Q9HAU5 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC6.49□□□□□ -1.37
UPF2Q9HAU5 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.49□□□□□ -1.37
UPF2Q9HAU5 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.49□□□□□ -1.37
UPF2Q9HAU5 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.49□□□□□ -1.37
UPF2Q9HAU5 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.49□□□□□ -1.37
UPF2Q9HAU5 AL512637.1-201ENST00000439523 1231 ntBASIC6.49□□□□□ -1.37
UPF2Q9HAU5 AMYP1-201ENST00000440059 1023 ntBASIC6.49□□□□□ -1.37
UPF2Q9HAU5 TIMM8BP2-201ENST00000445940 251 ntBASIC6.49□□□□□ -1.37
UPF2Q9HAU5 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC6.49□□□□□ -1.37
UPF2Q9HAU5 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
UPF2Q9HAU5 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC6.49□□□□□ -1.37
UPF2Q9HAU5 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC6.49□□□□□ -1.37
UPF2Q9HAU5 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.49□□□□□ -1.37
UPF2Q9HAU5 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC6.49□□□□□ -1.37
UPF2Q9HAU5 AP006245.2-201ENST00000522004 300 ntBASIC6.49□□□□□ -1.37
UPF2Q9HAU5 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC6.49□□□□□ -1.37
UPF2Q9HAU5 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC6.49□□□□□ -1.37
UPF2Q9HAU5 AL731532.2-201ENST00000623542 1953 ntBASIC6.49□□□□□ -1.37
UPF2Q9HAU5 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
UPF2Q9HAU5 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC6.48□□□□□ -1.37
UPF2Q9HAU5 AC063976.2-201ENST00000425667 3556 ntBASIC6.48□□□□□ -1.37
UPF2Q9HAU5 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
UPF2Q9HAU5 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
UPF2Q9HAU5 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
UPF2Q9HAU5 SUGT1P2-201ENST00000379452 992 ntBASIC6.48□□□□□ -1.37
UPF2Q9HAU5 RPS3AP2-201ENST00000407190 754 ntBASIC6.48□□□□□ -1.37
UPF2Q9HAU5 GNG5P5-201ENST00000420444 220 ntBASIC6.48□□□□□ -1.37
UPF2Q9HAU5 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC6.48□□□□□ -1.37
UPF2Q9HAU5 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.48□□□□□ -1.37
UPF2Q9HAU5 MTND6P12-201ENST00000428247 522 ntBASIC6.48□□□□□ -1.37
UPF2Q9HAU5 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC6.48□□□□□ -1.37
UPF2Q9HAU5 AC005297.1-201ENST00000444765 862 ntBASIC6.48□□□□□ -1.37
UPF2Q9HAU5 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC6.48□□□□□ -1.37
UPF2Q9HAU5 AC079168.1-201ENST00000458741 345 ntBASIC6.48□□□□□ -1.37
UPF2Q9HAU5 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
UPF2Q9HAU5 AC025458.1-201ENST00000506046 166 ntBASIC6.48□□□□□ -1.37
UPF2Q9HAU5 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.48□□□□□ -1.37
UPF2Q9HAU5 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.48□□□□□ -1.37
UPF2Q9HAU5 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.48□□□□□ -1.37
UPF2Q9HAU5 AC005341.1-201ENST00000571086 708 ntBASIC6.48□□□□□ -1.37
UPF2Q9HAU5 AC012616.1-201ENST00000600294 197 ntBASIC6.48□□□□□ -1.37
UPF2Q9HAU5 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC6.48□□□□□ -1.37
UPF2Q9HAU5 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
UPF2Q9HAU5 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
UPF2Q9HAU5 LCMT1-AS2-202ENST00000565214 5666 ntBASIC6.48□□□□□ -1.37
UPF2Q9HAU5 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
UPF2Q9HAU5 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
UPF2Q9HAU5 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
UPF2Q9HAU5 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
UPF2Q9HAU5 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
UPF2Q9HAU5 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
UPF2Q9HAU5 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
UPF2Q9HAU5 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
UPF2Q9HAU5 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC6.47□□□□□ -1.37
UPF2Q9HAU5 AC090181.3-201ENST00000624777 1514 ntBASIC6.47□□□□□ -1.37
UPF2Q9HAU5 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
UPF2Q9HAU5 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
UPF2Q9HAU5 AMELX-201ENST00000348912 737 ntTSL 5 BASIC6.47□□□□□ -1.37
UPF2Q9HAU5 AC005294.1-201ENST00000355509 281 ntBASIC6.47□□□□□ -1.37
UPF2Q9HAU5 MIR375-201ENST00000362103 64 ntBASIC6.47□□□□□ -1.37
UPF2Q9HAU5 RNU1-65P-201ENST00000363919 148 ntBASIC6.47□□□□□ -1.37
UPF2Q9HAU5 MIR589-201ENST00000385238 99 ntBASIC6.47□□□□□ -1.37
UPF2Q9HAU5 SMC4P1-201ENST00000414479 527 ntBASIC6.47□□□□□ -1.37
UPF2Q9HAU5 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.47□□□□□ -1.37
UPF2Q9HAU5 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.47□□□□□ -1.37
UPF2Q9HAU5 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC6.47□□□□□ -1.37
UPF2Q9HAU5 BX842559.2-201ENST00000451418 605 ntBASIC6.47□□□□□ -1.37
UPF2Q9HAU5 RN7SL72P-201ENST00000460697 269 ntBASIC6.47□□□□□ -1.37
UPF2Q9HAU5 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms