Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 RN7SKP183-201ENST00000517169 324 ntBASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 AC116917.1-201ENST00000520558 305 ntBASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 BUB1P1-201ENST00000603541 607 ntBASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 AC093765.1-201ENST00000603758 881 ntBASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 IGKV1OR2-9-201ENST00000603957 287 ntBASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 IGKV1OR2-11-201ENST00000604120 287 ntBASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 AC010738.1-201ENST00000604970 987 ntBASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 AL139286.2-201ENST00000606838 396 ntBASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 AC073114.1-201ENST00000612027 490 ntBASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 AC005277.2-201ENST00000617898 390 ntBASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 AC092159.4-201ENST00000624944 550 ntBASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 AC019226.1-201ENST00000625666 515 ntBASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 AC005225.5-201ENST00000623547 2225 ntBASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 AC105749.1-201ENST00000631338 2008 ntBASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
FOXP3Q9BZS1 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 AC090220.1-201ENST00000593078 1699 ntBASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 SNORA11.3-201ENST00000408471 128 ntBASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 AC006366.1-201ENST00000422002 759 ntBASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 RPL7P32-201ENST00000457119 744 ntBASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 AC019084.1-201ENST00000457337 432 ntBASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 AC090114.3-201ENST00000479267 829 ntBASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 AC010460.1-201ENST00000507087 466 ntBASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 AP005902.2-201ENST00000518393 307 ntBASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 AC140063.1-201ENST00000541343 259 ntBASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 ELOCP32-201ENST00000548625 324 ntBASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 AC090888.3-201ENST00000558917 509 ntBASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 AP003115.1-201ENST00000569849 463 ntBASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 AC012254.4-201ENST00000588843 273 ntBASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 VN1R90P-201ENST00000595717 726 ntBASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 SNORA11.6-201ENST00000619030 128 ntBASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 AL133370.2-201ENST00000619934 439 ntBASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 AL590240.3-201ENST00000621416 943 ntBASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 MIR6823-201ENST00000622118 61 ntBASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 AC027559.1-201ENST00000636288 271 ntBASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
FOXP3Q9BZS1 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms