Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.95□□□□□ -1.46
TRIM54Q9BYV2 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM54Q9BYV2 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM54Q9BYV2 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
TRIM54Q9BYV2 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
TRIM54Q9BYV2 AL121839.2-201ENST00000565058 6943 ntBASIC5.95□□□□□ -1.46
TRIM54Q9BYV2 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 AC093297.3-201ENST00000607056 2517 ntBASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 ZNF29P-201ENST00000225587 168 ntBASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 RNU6-1263P-201ENST00000384601 106 ntBASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 RNA5SP198-201ENST00000410376 127 ntBASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 AL096829.1-201ENST00000413677 457 ntBASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 PTCD2P2-201ENST00000415579 1095 ntBASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 AL590806.1-201ENST00000415818 853 ntBASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 THEM7P-201ENST00000419556 672 ntBASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 PRUNEP1-201ENST00000425846 705 ntBASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 AL590399.2-201ENST00000427536 309 ntBASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 AL035458.1-201ENST00000433096 585 ntBASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 CUBNP2-201ENST00000443534 1139 ntBASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 TRIM60P16-201ENST00000444048 694 ntBASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 AL162739.1-201ENST00000450606 307 ntBASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 AL139824.2-201ENST00000458731 1095 ntBASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 RNA5SP434-201ENST00000516647 121 ntBASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 IGHV3-63-201ENST00000518422 341 ntBASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 AC013701.1-201ENST00000522657 465 ntBASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 AL132857.1-201ENST00000555180 708 ntBASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 AC121758.1-202ENST00000556917 658 ntBASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 AL049779.3-201ENST00000557141 606 ntBASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 AL078601.3-201ENST00000573303 535 ntBASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 AP001160.4-201ENST00000596971 382 ntBASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 AC011500.1-201ENST00000601963 469 ntBASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 Z82195.1-201ENST00000604558 398 ntBASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 AC012557.1-201ENST00000607115 611 ntBASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 RFPL4AP6-201ENST00000616792 846 ntBASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 AC022079.2-201ENST00000619739 566 ntBASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 OR8G3P-202ENST00000641572 1255 ntBASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 THAP12P9-201ENST00000503971 2360 ntBASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM54Q9BYV2 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.93□□□□□ -1.46
TRIM54Q9BYV2 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.93□□□□□ -1.46
TRIM54Q9BYV2 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
TRIM54Q9BYV2 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
TRIM54Q9BYV2 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.93□□□□□ -1.46
TRIM54Q9BYV2 AC092070.2-203ENST00000598377 3644 ntBASIC5.93□□□□□ -1.46
TRIM54Q9BYV2 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
TRIM54Q9BYV2 AC027575.3-201ENST00000583058 2747 ntBASIC5.93□□□□□ -1.46
TRIM54Q9BYV2 AC022325.1-201ENST00000502748 2199 ntBASIC5.93□□□□□ -1.46
TRIM54Q9BYV2 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TRIM54Q9BYV2 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TRIM54Q9BYV2 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
TRIM54Q9BYV2 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
TRIM54Q9BYV2 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
TRIM54Q9BYV2 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.93□□□□□ -1.46
TRIM54Q9BYV2 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.93□□□□□ -1.46
TRIM54Q9BYV2 SNORA21-201ENST00000362423 132 ntBASIC5.93□□□□□ -1.46
TRIM54Q9BYV2 RNU1-134P-201ENST00000362935 165 ntBASIC5.93□□□□□ -1.46
TRIM54Q9BYV2 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms