Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC7□□□□□ -1.29
CHMP4CQ96CF2 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC7□□□□□ -1.29
CHMP4CQ96CF2 PCNAP4-201ENST00000532690 730 ntBASIC7□□□□□ -1.29
CHMP4CQ96CF2 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC7□□□□□ -1.29
CHMP4CQ96CF2 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC7□□□□□ -1.29
CHMP4CQ96CF2 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC7□□□□□ -1.29
CHMP4CQ96CF2 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC7□□□□□ -1.29
CHMP4CQ96CF2 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC7□□□□□ -1.29
CHMP4CQ96CF2 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC7□□□□□ -1.29
CHMP4CQ96CF2 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC7□□□□□ -1.29
CHMP4CQ96CF2 AC126365.2-201ENST00000580630 379 ntBASIC7□□□□□ -1.29
CHMP4CQ96CF2 MTCO3P22-201ENST00000603219 784 ntBASIC7□□□□□ -1.29
CHMP4CQ96CF2 AL583832.1-201ENST00000603227 784 ntBASIC7□□□□□ -1.29
CHMP4CQ96CF2 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC7□□□□□ -1.29
CHMP4CQ96CF2 AC005021.1-201ENST00000608730 355 ntBASIC7□□□□□ -1.29
CHMP4CQ96CF2 AC129778.1-202ENST00000623812 261 ntBASIC7□□□□□ -1.29
CHMP4CQ96CF2 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC7□□□□□ -1.29
CHMP4CQ96CF2 AL591379.1-207ENST00000635982 261 ntBASIC7□□□□□ -1.29
CHMP4CQ96CF2 AMYH02020865.1-205ENST00000636189 261 ntBASIC7□□□□□ -1.29
CHMP4CQ96CF2 OR11H2-202ENST00000641517 1085 ntBASIC7□□□□□ -1.29
CHMP4CQ96CF2 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC7□□□□□ -1.29
CHMP4CQ96CF2 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
CHMP4CQ96CF2 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
CHMP4CQ96CF2 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC7□□□□□ -1.29
CHMP4CQ96CF2 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC7□□□□□ -1.29
CHMP4CQ96CF2 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC7□□□□□ -1.29
CHMP4CQ96CF2 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC7□□□□□ -1.29
CHMP4CQ96CF2 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC7□□□□□ -1.29
CHMP4CQ96CF2 KYNUP3-201ENST00000574386 1341 ntBASIC7□□□□□ -1.29
CHMP4CQ96CF2 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CHMP4CQ96CF2 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
CHMP4CQ96CF2 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.99□□□□□ -1.29
CHMP4CQ96CF2 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC6.99□□□□□ -1.29
CHMP4CQ96CF2 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CHMP4CQ96CF2 AC012078.1-201ENST00000405035 1646 ntBASIC6.99□□□□□ -1.29
CHMP4CQ96CF2 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
CHMP4CQ96CF2 RN7SKP186-201ENST00000365371 303 ntBASIC6.99□□□□□ -1.29
CHMP4CQ96CF2 AL031985.1-201ENST00000392713 418 ntBASIC6.99□□□□□ -1.29
CHMP4CQ96CF2 MIR1203-201ENST00000408812 85 ntBASIC6.99□□□□□ -1.29
CHMP4CQ96CF2 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.99□□□□□ -1.29
CHMP4CQ96CF2 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.99□□□□□ -1.29
CHMP4CQ96CF2 DSTNP5-201ENST00000427921 523 ntBASIC6.99□□□□□ -1.29
CHMP4CQ96CF2 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC6.99□□□□□ -1.29
CHMP4CQ96CF2 AC096775.1-201ENST00000437724 448 ntBASIC6.99□□□□□ -1.29
CHMP4CQ96CF2 AP006222.1-205ENST00000450734 457 ntBASIC6.99□□□□□ -1.29
CHMP4CQ96CF2 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.99□□□□□ -1.29
CHMP4CQ96CF2 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.99□□□□□ -1.29
CHMP4CQ96CF2 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC6.99□□□□□ -1.29
CHMP4CQ96CF2 AC093014.1-201ENST00000548926 724 ntBASIC6.99□□□□□ -1.29
CHMP4CQ96CF2 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.99□□□□□ -1.29
CHMP4CQ96CF2 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.99□□□□□ -1.29
CHMP4CQ96CF2 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC6.99□□□□□ -1.29
CHMP4CQ96CF2 AC090236.2-201ENST00000587933 1101 ntBASIC6.99□□□□□ -1.29
CHMP4CQ96CF2 AC012254.3-201ENST00000591183 2117 ntBASIC6.99□□□□□ -1.29
CHMP4CQ96CF2 LSM1P2-201ENST00000604911 322 ntBASIC6.99□□□□□ -1.29
CHMP4CQ96CF2 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.99□□□□□ -1.29
CHMP4CQ96CF2 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CHMP4CQ96CF2 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CHMP4CQ96CF2 AL138955.1-201ENST00000622881 1040 ntBASIC6.99□□□□□ -1.29
CHMP4CQ96CF2 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC6.99□□□□□ -1.29
CHMP4CQ96CF2 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CHMP4CQ96CF2 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CHMP4CQ96CF2 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CHMP4CQ96CF2 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
CHMP4CQ96CF2 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CHMP4CQ96CF2 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 AC097063.1-201ENST00000426714 1797 ntBASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 RAD1P1-201ENST00000231383 813 ntBASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 U3.23-201ENST00000391132 200 ntBASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 AC126120.1-201ENST00000431082 470 ntBASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 USP24P1-201ENST00000433802 779 ntBASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 TUBB4BP6-201ENST00000437576 479 ntBASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 AL391987.1-201ENST00000441025 200 ntBASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 CFL1P4-201ENST00000451536 498 ntBASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 AC093166.4-201ENST00000457867 318 ntBASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 AC018638.3-201ENST00000461273 132 ntBASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 NPM1P17-201ENST00000479221 602 ntBASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 IGKV3D-34-201ENST00000522638 302 ntBASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6.98□□□□□ -1.29
CHMP4CQ96CF2 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms