Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.21□□□□□ -1.57
PTP4A1Q93096 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
PTP4A1Q93096 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.21□□□□□ -1.57
PTP4A1Q93096 AC104966.1-201ENST00000467010 1464 ntBASIC5.21□□□□□ -1.58
PTP4A1Q93096 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PTP4A1Q93096 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PTP4A1Q93096 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
PTP4A1Q93096 AP001029.2-203ENST00000589795 4910 ntBASIC5.21□□□□□ -1.58
PTP4A1Q93096 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.21□□□□□ -1.58
PTP4A1Q93096 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.21□□□□□ -1.58
PTP4A1Q93096 AC104260.2-201ENST00000623551 3497 ntBASIC5.21□□□□□ -1.58
PTP4A1Q93096 SELENOWP1-201ENST00000322792 252 ntBASIC5.21□□□□□ -1.58
PTP4A1Q93096 RN7SKP74-201ENST00000362849 309 ntBASIC5.21□□□□□ -1.58
PTP4A1Q93096 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.21□□□□□ -1.58
PTP4A1Q93096 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
PTP4A1Q93096 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
PTP4A1Q93096 MIR1275-201ENST00000408770 80 ntBASIC5.21□□□□□ -1.58
PTP4A1Q93096 RNA5SP296-201ENST00000410523 111 ntBASIC5.21□□□□□ -1.58
PTP4A1Q93096 RN7SKP222-201ENST00000410651 315 ntBASIC5.21□□□□□ -1.58
PTP4A1Q93096 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.21□□□□□ -1.58
PTP4A1Q93096 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.21□□□□□ -1.58
PTP4A1Q93096 RNGTTP1-201ENST00000420965 728 ntBASIC5.21□□□□□ -1.58
PTP4A1Q93096 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.21□□□□□ -1.58
PTP4A1Q93096 AL136231.1-201ENST00000429407 730 ntBASIC5.21□□□□□ -1.58
PTP4A1Q93096 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.21□□□□□ -1.58
PTP4A1Q93096 AL353662.1-201ENST00000439099 327 ntBASIC5.21□□□□□ -1.58
PTP4A1Q93096 AC023141.8-201ENST00000442554 208 ntBASIC5.21□□□□□ -1.58
PTP4A1Q93096 RPS10P18-201ENST00000442662 495 ntBASIC5.21□□□□□ -1.58
PTP4A1Q93096 AC092106.1-201ENST00000444291 373 ntBASIC5.21□□□□□ -1.58
PTP4A1Q93096 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.21□□□□□ -1.58
PTP4A1Q93096 PSMC1P13-201ENST00000458195 985 ntBASIC5.21□□□□□ -1.58
PTP4A1Q93096 RPS4XP12-201ENST00000461747 709 ntBASIC5.21□□□□□ -1.58
PTP4A1Q93096 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PTP4A1Q93096 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.21□□□□□ -1.58
PTP4A1Q93096 AC023424.1-201ENST00000496058 459 ntBASIC5.21□□□□□ -1.58
PTP4A1Q93096 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.21□□□□□ -1.58
PTP4A1Q93096 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.21□□□□□ -1.58
PTP4A1Q93096 PRMT5P1-201ENST00000514351 598 ntBASIC5.21□□□□□ -1.58
PTP4A1Q93096 RNA5SP228-201ENST00000516232 133 ntBASIC5.21□□□□□ -1.58
PTP4A1Q93096 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.21□□□□□ -1.58
PTP4A1Q93096 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC5.21□□□□□ -1.58
PTP4A1Q93096 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.21□□□□□ -1.58
PTP4A1Q93096 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.21□□□□□ -1.58
PTP4A1Q93096 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.21□□□□□ -1.58
PTP4A1Q93096 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.21□□□□□ -1.58
PTP4A1Q93096 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PTP4A1Q93096 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.21□□□□□ -1.58
PTP4A1Q93096 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.21□□□□□ -1.58
PTP4A1Q93096 AC068768.2-201ENST00000602352 343 ntBASIC5.21□□□□□ -1.58
PTP4A1Q93096 AL133406.3-201ENST00000606817 541 ntBASIC5.21□□□□□ -1.58
PTP4A1Q93096 FAM72A-208ENST00000607379 1139 ntBASIC5.21□□□□□ -1.58
PTP4A1Q93096 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PTP4A1Q93096 MIR7109-201ENST00000613748 65 ntBASIC5.21□□□□□ -1.58
PTP4A1Q93096 AL035661.1-201ENST00000620459 1144 ntBASIC5.21□□□□□ -1.58
PTP4A1Q93096 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.21□□□□□ -1.58
PTP4A1Q93096 AP003497.2-201ENST00000624220 967 ntBASIC5.21□□□□□ -1.58
PTP4A1Q93096 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC5.21□□□□□ -1.58
PTP4A1Q93096 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.21□□□□□ -1.58
PTP4A1Q93096 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
PTP4A1Q93096 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
PTP4A1Q93096 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.21□□□□□ -1.58
PTP4A1Q93096 PSG10P-201ENST00000501199 1500 ntBASIC5.21□□□□□ -1.58
PTP4A1Q93096 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.21□□□□□ -1.58
PTP4A1Q93096 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PTP4A1Q93096 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
PTP4A1Q93096 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
PTP4A1Q93096 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PTP4A1Q93096 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.21□□□□□ -1.58
PTP4A1Q93096 AP000756.2-201ENST00000624168 2567 ntBASIC5.2□□□□□ -1.58
PTP4A1Q93096 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PTP4A1Q93096 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
PTP4A1Q93096 HSPD1P11-201ENST00000508643 1702 ntBASIC5.2□□□□□ -1.58
PTP4A1Q93096 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
PTP4A1Q93096 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PTP4A1Q93096 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.2□□□□□ -1.58
PTP4A1Q93096 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.2□□□□□ -1.58
PTP4A1Q93096 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
PTP4A1Q93096 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PTP4A1Q93096 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.2□□□□□ -1.58
PTP4A1Q93096 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.2□□□□□ -1.58
PTP4A1Q93096 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PTP4A1Q93096 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PTP4A1Q93096 AC017002.4-201ENST00000604721 1525 ntBASIC5.2□□□□□ -1.58
PTP4A1Q93096 RN7SKP185-201ENST00000362813 326 ntBASIC5.2□□□□□ -1.58
PTP4A1Q93096 RNU1-65P-201ENST00000363919 148 ntBASIC5.2□□□□□ -1.58
PTP4A1Q93096 SNORA27.3-201ENST00000364937 134 ntBASIC5.2□□□□□ -1.58
PTP4A1Q93096 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
PTP4A1Q93096 RNU6-31P-201ENST00000384388 108 ntBASIC5.2□□□□□ -1.58
PTP4A1Q93096 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
PTP4A1Q93096 AL096711.1-201ENST00000404780 554 ntBASIC5.2□□□□□ -1.58
PTP4A1Q93096 RPL6P29-201ENST00000414863 865 ntBASIC5.2□□□□□ -1.58
PTP4A1Q93096 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.2□□□□□ -1.58
PTP4A1Q93096 VN1R21P-201ENST00000426703 765 ntBASIC5.2□□□□□ -1.58
PTP4A1Q93096 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.2□□□□□ -1.58
PTP4A1Q93096 BMS1P10-201ENST00000443754 1120 ntBASIC5.2□□□□□ -1.58
PTP4A1Q93096 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.2□□□□□ -1.58
PTP4A1Q93096 AL157777.1-201ENST00000468100 304 ntBASIC5.2□□□□□ -1.58
PTP4A1Q93096 RPL21P6-201ENST00000479171 504 ntBASIC5.2□□□□□ -1.58
PTP4A1Q93096 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.2□□□□□ -1.58
PTP4A1Q93096 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms