Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AP000776.1-201ENST00000530032 1663 ntBASIC8.58□□□□□ -1.04
RC3H1Q5TC82 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
RC3H1Q5TC82 ARHGAP42P5-201ENST00000548856 2936 ntBASIC8.58□□□□□ -1.04
RC3H1Q5TC82 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
RC3H1Q5TC82 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC8.58□□□□□ -1.04
RC3H1Q5TC82 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC8.58□□□□□ -1.04
RC3H1Q5TC82 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC8.58□□□□□ -1.04
RC3H1Q5TC82 AC006058.1-201ENST00000568686 5067 ntBASIC8.58□□□□□ -1.04
RC3H1Q5TC82 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
RC3H1Q5TC82 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC8.58□□□□□ -1.04
RC3H1Q5TC82 CNOT6LP1-201ENST00000559681 1462 ntBASIC8.57□□□□□ -1.04
RC3H1Q5TC82 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
RC3H1Q5TC82 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC8.57□□□□□ -1.04
RC3H1Q5TC82 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
RC3H1Q5TC82 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
RC3H1Q5TC82 EIF4E3-204ENST00000425534 9949 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
RC3H1Q5TC82 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC8.57□□□□□ -1.04
RC3H1Q5TC82 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
RC3H1Q5TC82 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
RC3H1Q5TC82 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC8.57□□□□□ -1.04
RC3H1Q5TC82 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
RC3H1Q5TC82 AC125238.2-201ENST00000430003 1440 ntBASIC8.57□□□□□ -1.04
RC3H1Q5TC82 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC8.57□□□□□ -1.04
RC3H1Q5TC82 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
RC3H1Q5TC82 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
RC3H1Q5TC82 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
RC3H1Q5TC82 HIST1H2BN-203ENST00000606613 4137 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
RC3H1Q5TC82 TMPRSS11D-201ENST00000283916 2817 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
RC3H1Q5TC82 IQCA1-206ENST00000431676 3069 ntAPPRIS ALT2 TSL 2 BASIC8.57□□□□□ -1.04
RC3H1Q5TC82 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
RC3H1Q5TC82 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
RC3H1Q5TC82 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
RC3H1Q5TC82 AL590762.1-201ENST00000391782 432 ntBASIC8.57□□□□□ -1.04
RC3H1Q5TC82 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC8.57□□□□□ -1.04
RC3H1Q5TC82 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC8.57□□□□□ -1.04
RC3H1Q5TC82 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC8.57□□□□□ -1.04
RC3H1Q5TC82 AC008850.1-201ENST00000427546 362 ntBASIC8.57□□□□□ -1.04
RC3H1Q5TC82 RPSAP65-201ENST00000429660 595 ntBASIC8.57□□□□□ -1.04
RC3H1Q5TC82 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC8.57□□□□□ -1.04
RC3H1Q5TC82 DNAJA1P6-201ENST00000437347 354 ntBASIC8.57□□□□□ -1.04
RC3H1Q5TC82 RPL22P17-201ENST00000438729 315 ntBASIC8.57□□□□□ -1.04
RC3H1Q5TC82 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC8.57□□□□□ -1.04
RC3H1Q5TC82 RPL5P7-201ENST00000444235 813 ntBASIC8.57□□□□□ -1.04
RC3H1Q5TC82 BX322784.1-201ENST00000455793 1077 ntBASIC8.57□□□□□ -1.04
RC3H1Q5TC82 CDC42P1-201ENST00000456658 548 ntBASIC8.57□□□□□ -1.04
RC3H1Q5TC82 OR9M1P-201ENST00000459641 921 ntBASIC8.57□□□□□ -1.04
RC3H1Q5TC82 AC146507.1-201ENST00000468335 354 ntBASIC8.57□□□□□ -1.04
RC3H1Q5TC82 AC094085.1-201ENST00000468914 584 ntBASIC8.57□□□□□ -1.04
RC3H1Q5TC82 RBM43P1-201ENST00000476891 1081 ntBASIC8.57□□□□□ -1.04
RC3H1Q5TC82 RN7SL569P-201ENST00000494652 288 ntBASIC8.57□□□□□ -1.04
RC3H1Q5TC82 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC8.57□□□□□ -1.04
RC3H1Q5TC82 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC8.57□□□□□ -1.04
RC3H1Q5TC82 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC8.57□□□□□ -1.04
RC3H1Q5TC82 AC018645.1-201ENST00000505003 109 ntBASIC8.57□□□□□ -1.04
RC3H1Q5TC82 AC012560.1-203ENST00000510550 595 ntTSL 4 BASIC8.57□□□□□ -1.04
RC3H1Q5TC82 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC8.57□□□□□ -1.04
RC3H1Q5TC82 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC8.57□□□□□ -1.04
RC3H1Q5TC82 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
RC3H1Q5TC82 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC8.57□□□□□ -1.04
RC3H1Q5TC82 OR5AZ1P-201ENST00000527448 943 ntBASIC8.57□□□□□ -1.04
RC3H1Q5TC82 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC8.57□□□□□ -1.04
RC3H1Q5TC82 AC008127.2-201ENST00000549925 1075 ntBASIC8.57□□□□□ -1.04
RC3H1Q5TC82 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC8.57□□□□□ -1.04
RC3H1Q5TC82 AC012557.1-201ENST00000607115 611 ntBASIC8.57□□□□□ -1.04
RC3H1Q5TC82 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC8.57□□□□□ -1.04
RC3H1Q5TC82 AC026951.2-201ENST00000613847 241 ntBASIC8.57□□□□□ -1.04
RC3H1Q5TC82 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
RC3H1Q5TC82 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
RC3H1Q5TC82 BOLL-204ENST00000430004 2987 ntTSL 2 BASIC8.57□□□□□ -1.04
RC3H1Q5TC82 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
RC3H1Q5TC82 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
RC3H1Q5TC82 AC131649.2-201ENST00000624925 4439 ntBASIC8.57□□□□□ -1.04
RC3H1Q5TC82 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
RC3H1Q5TC82 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC8.56□□□□□ -1.04
RC3H1Q5TC82 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
RC3H1Q5TC82 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC8.56□□□□□ -1.04
RC3H1Q5TC82 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
RC3H1Q5TC82 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
RC3H1Q5TC82 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
RC3H1Q5TC82 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
RC3H1Q5TC82 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
RC3H1Q5TC82 Y_RNA.326-201ENST00000365176 113 ntBASIC8.56□□□□□ -1.04
RC3H1Q5TC82 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
RC3H1Q5TC82 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC8.56□□□□□ -1.04
RC3H1Q5TC82 AC003045.1-201ENST00000398779 713 ntBASIC8.56□□□□□ -1.04
RC3H1Q5TC82 AL355375.1-201ENST00000405686 392 ntBASIC8.56□□□□□ -1.04
RC3H1Q5TC82 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC8.56□□□□□ -1.04
RC3H1Q5TC82 AC027644.1-201ENST00000419595 298 ntBASIC8.56□□□□□ -1.04
RC3H1Q5TC82 AL022400.1-201ENST00000423946 935 ntBASIC8.56□□□□□ -1.04
RC3H1Q5TC82 KRTAP3-4P-201ENST00000430780 280 ntBASIC8.56□□□□□ -1.04
RC3H1Q5TC82 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC8.56□□□□□ -1.04
RC3H1Q5TC82 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC8.56□□□□□ -1.04
RC3H1Q5TC82 AC016908.1-201ENST00000442571 1219 ntBASIC8.56□□□□□ -1.04
RC3H1Q5TC82 TCEA1P3-201ENST00000443005 880 ntBASIC8.56□□□□□ -1.04
RC3H1Q5TC82 GDI2P2-201ENST00000445131 608 ntBASIC8.56□□□□□ -1.04
RC3H1Q5TC82 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC8.56□□□□□ -1.04
RC3H1Q5TC82 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
RC3H1Q5TC82 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC8.56□□□□□ -1.04
RC3H1Q5TC82 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC8.56□□□□□ -1.04
RC3H1Q5TC82 NCOR1P1-202ENST00000486162 291 ntBASIC8.56□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms