Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC38Q502W7 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.08□□□□□ -1.44
CCDC38Q502W7 HMGB3P7-201ENST00000400214 611 ntBASIC6.08□□□□□ -1.44
CCDC38Q502W7 RPL5P19-201ENST00000404228 893 ntBASIC6.08□□□□□ -1.44
CCDC38Q502W7 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.08□□□□□ -1.44
CCDC38Q502W7 RPL35AP31-201ENST00000418340 337 ntBASIC6.08□□□□□ -1.44
CCDC38Q502W7 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.08□□□□□ -1.44
CCDC38Q502W7 RPL24P2-201ENST00000421023 475 ntBASIC6.08□□□□□ -1.44
CCDC38Q502W7 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.08□□□□□ -1.44
CCDC38Q502W7 AC099782.1-201ENST00000425889 474 ntBASIC6.08□□□□□ -1.44
CCDC38Q502W7 HSPE1P16-201ENST00000426640 348 ntBASIC6.08□□□□□ -1.44
CCDC38Q502W7 AL160175.1-201ENST00000428124 247 ntBASIC6.08□□□□□ -1.44
CCDC38Q502W7 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC6.08□□□□□ -1.44
CCDC38Q502W7 AC023141.3-201ENST00000436698 278 ntBASIC6.08□□□□□ -1.44
CCDC38Q502W7 AL663074.2-201ENST00000440621 479 ntBASIC6.08□□□□□ -1.44
CCDC38Q502W7 OR52E7P-201ENST00000452394 933 ntBASIC6.08□□□□□ -1.44
CCDC38Q502W7 AC002553.3-201ENST00000453002 341 ntBASIC6.08□□□□□ -1.44
CCDC38Q502W7 RPL12P39-201ENST00000455456 496 ntBASIC6.08□□□□□ -1.44
CCDC38Q502W7 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC38Q502W7 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC38Q502W7 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.08□□□□□ -1.44
CCDC38Q502W7 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.08□□□□□ -1.44
CCDC38Q502W7 HAUS1P1-201ENST00000505275 832 ntBASIC6.08□□□□□ -1.44
CCDC38Q502W7 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC6.08□□□□□ -1.44
CCDC38Q502W7 HAUS1P3-201ENST00000523909 662 ntBASIC6.08□□□□□ -1.44
CCDC38Q502W7 AP003033.2-201ENST00000528901 805 ntBASIC6.08□□□□□ -1.44
CCDC38Q502W7 UBTFL9-201ENST00000534504 1148 ntBASIC6.08□□□□□ -1.44
CCDC38Q502W7 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC38Q502W7 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC6.08□□□□□ -1.44
CCDC38Q502W7 AL359219.2-201ENST00000555184 348 ntBASIC6.08□□□□□ -1.44
CCDC38Q502W7 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC38Q502W7 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC6.08□□□□□ -1.44
CCDC38Q502W7 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.08□□□□□ -1.44
CCDC38Q502W7 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC6.08□□□□□ -1.44
CCDC38Q502W7 MTATP6P2-201ENST00000603319 678 ntBASIC6.08□□□□□ -1.44
CCDC38Q502W7 SUMO2P14-201ENST00000604488 293 ntBASIC6.08□□□□□ -1.44
CCDC38Q502W7 MIR6721-201ENST00000617181 87 ntBASIC6.08□□□□□ -1.44
CCDC38Q502W7 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC6.08□□□□□ -1.44
CCDC38Q502W7 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC6.08□□□□□ -1.44
CCDC38Q502W7 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
CCDC38Q502W7 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC6.08□□□□□ -1.44
CCDC38Q502W7 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC38Q502W7 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC38Q502W7 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC38Q502W7 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC38Q502W7 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC38Q502W7 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC38Q502W7 AC097063.1-201ENST00000426714 1797 ntBASIC6.08□□□□□ -1.44
CCDC38Q502W7 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.08□□□□□ -1.44
CCDC38Q502W7 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC38Q502W7 AL034546.1-201ENST00000623740 3693 ntBASIC6.07□□□□□ -1.44
CCDC38Q502W7 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC38Q502W7 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC38Q502W7 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC6.07□□□□□ -1.44
CCDC38Q502W7 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC38Q502W7 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.07□□□□□ -1.44
CCDC38Q502W7 AL136520.1-201ENST00000600311 1322 ntBASIC6.07□□□□□ -1.44
CCDC38Q502W7 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC38Q502W7 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
CCDC38Q502W7 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC38Q502W7 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC38Q502W7 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC6.07□□□□□ -1.44
CCDC38Q502W7 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC38Q502W7 SNORA79B-201ENST00000410557 148 ntBASIC6.07□□□□□ -1.44
CCDC38Q502W7 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.07□□□□□ -1.44
CCDC38Q502W7 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.07□□□□□ -1.44
CCDC38Q502W7 AC092570.3-201ENST00000420113 693 ntBASIC6.07□□□□□ -1.44
CCDC38Q502W7 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC38Q502W7 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC38Q502W7 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC6.07□□□□□ -1.44
CCDC38Q502W7 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC6.07□□□□□ -1.44
CCDC38Q502W7 RNFT1P2-201ENST00000443064 757 ntBASIC6.07□□□□□ -1.44
CCDC38Q502W7 MOB1AP2-201ENST00000446060 614 ntBASIC6.07□□□□□ -1.44
CCDC38Q502W7 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.07□□□□□ -1.44
CCDC38Q502W7 AC016027.4-201ENST00000450866 277 ntBASIC6.07□□□□□ -1.44
CCDC38Q502W7 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.07□□□□□ -1.44
CCDC38Q502W7 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC6.07□□□□□ -1.44
CCDC38Q502W7 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.07□□□□□ -1.44
CCDC38Q502W7 CDH12P2-201ENST00000504393 298 ntBASIC6.07□□□□□ -1.44
CCDC38Q502W7 OR7E99P-201ENST00000505750 922 ntBASIC6.07□□□□□ -1.44
CCDC38Q502W7 MAST4-IT1-201ENST00000514241 658 ntBASIC6.07□□□□□ -1.44
CCDC38Q502W7 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC6.07□□□□□ -1.44
CCDC38Q502W7 OR4A41P-201ENST00000533053 928 ntBASIC6.07□□□□□ -1.44
CCDC38Q502W7 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.07□□□□□ -1.44
CCDC38Q502W7 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC38Q502W7 NELL2-211ENST00000548826 559 ntTSL 2 BASIC6.07□□□□□ -1.44
CCDC38Q502W7 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.07□□□□□ -1.44
CCDC38Q502W7 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.07□□□□□ -1.44
CCDC38Q502W7 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC38Q502W7 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.07□□□□□ -1.44
CCDC38Q502W7 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC6.07□□□□□ -1.44
CCDC38Q502W7 AL163952.1-202ENST00000569625 600 ntBASIC6.07□□□□□ -1.44
CCDC38Q502W7 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
CCDC38Q502W7 MIR4701-201ENST00000583094 63 ntBASIC6.07□□□□□ -1.44
CCDC38Q502W7 MIR4660-201ENST00000583549 74 ntBASIC6.07□□□□□ -1.44
CCDC38Q502W7 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC6.07□□□□□ -1.44
CCDC38Q502W7 AF230666.2-201ENST00000602328 725 ntBASIC6.07□□□□□ -1.44
CCDC38Q502W7 AC144521.1-201ENST00000607148 956 ntBASIC6.07□□□□□ -1.44
CCDC38Q502W7 AC096861.1-201ENST00000616652 240 ntBASIC6.07□□□□□ -1.44
CCDC38Q502W7 AC095038.2-201ENST00000621464 1070 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms