Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 RPL7L1P9-201ENST00000431298 745 ntBASIC5.99□□□□□ -1.45
USP41Q3LFD5 AL500527.1-201ENST00000448532 255 ntBASIC5.99□□□□□ -1.45
USP41Q3LFD5 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
USP41Q3LFD5 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.99□□□□□ -1.45
USP41Q3LFD5 RN7SL727P-201ENST00000482164 296 ntBASIC5.99□□□□□ -1.45
USP41Q3LFD5 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.99□□□□□ -1.45
USP41Q3LFD5 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.99□□□□□ -1.45
USP41Q3LFD5 AC093763.2-201ENST00000505334 1223 ntBASIC5.99□□□□□ -1.45
USP41Q3LFD5 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.99□□□□□ -1.45
USP41Q3LFD5 SNORA70.11-201ENST00000515987 138 ntBASIC5.99□□□□□ -1.45
USP41Q3LFD5 SNORA70.13-201ENST00000516116 138 ntBASIC5.99□□□□□ -1.45
USP41Q3LFD5 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
USP41Q3LFD5 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.99□□□□□ -1.45
USP41Q3LFD5 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.99□□□□□ -1.45
USP41Q3LFD5 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.99□□□□□ -1.45
USP41Q3LFD5 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.99□□□□□ -1.45
USP41Q3LFD5 OOSP1P2-201ENST00000579644 351 ntBASIC5.99□□□□□ -1.45
USP41Q3LFD5 MIR4311-201ENST00000580794 100 ntBASIC5.99□□□□□ -1.45
USP41Q3LFD5 NANOGP3-201ENST00000605855 286 ntBASIC5.99□□□□□ -1.45
USP41Q3LFD5 AC136428.4-201ENST00000634254 1155 ntBASIC5.99□□□□□ -1.45
USP41Q3LFD5 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.99□□□□□ -1.45
USP41Q3LFD5 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
USP41Q3LFD5 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
USP41Q3LFD5 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.99□□□□□ -1.45
USP41Q3LFD5 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
USP41Q3LFD5 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.99□□□□□ -1.45
USP41Q3LFD5 AL161912.4-201ENST00000623889 2468 ntBASIC5.99□□□□□ -1.45
USP41Q3LFD5 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.99□□□□□ -1.45
USP41Q3LFD5 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
USP41Q3LFD5 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
USP41Q3LFD5 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
USP41Q3LFD5 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
USP41Q3LFD5 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
USP41Q3LFD5 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
USP41Q3LFD5 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.98□□□□□ -1.45
USP41Q3LFD5 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.98□□□□□ -1.45
USP41Q3LFD5 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
USP41Q3LFD5 RNA5SP453-201ENST00000362503 119 ntBASIC5.98□□□□□ -1.45
USP41Q3LFD5 RN7SKP6-201ENST00000364795 319 ntBASIC5.98□□□□□ -1.45
USP41Q3LFD5 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
USP41Q3LFD5 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
USP41Q3LFD5 SNORA70-201ENST00000384436 135 ntBASIC5.98□□□□□ -1.45
USP41Q3LFD5 NPM1P38-201ENST00000403835 865 ntBASIC5.98□□□□□ -1.45
USP41Q3LFD5 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
USP41Q3LFD5 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.98□□□□□ -1.45
USP41Q3LFD5 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.98□□□□□ -1.45
USP41Q3LFD5 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.98□□□□□ -1.45
USP41Q3LFD5 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.98□□□□□ -1.45
USP41Q3LFD5 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
USP41Q3LFD5 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.98□□□□□ -1.45
USP41Q3LFD5 RN7SL172P-201ENST00000460535 303 ntBASIC5.98□□□□□ -1.45
USP41Q3LFD5 RN7SL610P-201ENST00000463845 291 ntBASIC5.98□□□□□ -1.45
USP41Q3LFD5 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.98□□□□□ -1.45
USP41Q3LFD5 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.98□□□□□ -1.45
USP41Q3LFD5 HIGD1AP14-201ENST00000507617 282 ntBASIC5.98□□□□□ -1.45
USP41Q3LFD5 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.98□□□□□ -1.45
USP41Q3LFD5 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.98□□□□□ -1.45
USP41Q3LFD5 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.98□□□□□ -1.45
USP41Q3LFD5 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.98□□□□□ -1.45
USP41Q3LFD5 HAUS8P1-201ENST00000549005 542 ntBASIC5.98□□□□□ -1.45
USP41Q3LFD5 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.98□□□□□ -1.45
USP41Q3LFD5 AC044860.2-201ENST00000561005 179 ntBASIC5.98□□□□□ -1.45
USP41Q3LFD5 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC5.98□□□□□ -1.45
USP41Q3LFD5 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC5.98□□□□□ -1.45
USP41Q3LFD5 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.98□□□□□ -1.45
USP41Q3LFD5 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.98□□□□□ -1.45
USP41Q3LFD5 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.98□□□□□ -1.45
USP41Q3LFD5 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.98□□□□□ -1.45
USP41Q3LFD5 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.98□□□□□ -1.45
USP41Q3LFD5 AL583832.1-201ENST00000603227 784 ntBASIC5.98□□□□□ -1.45
USP41Q3LFD5 AL118522.2-201ENST00000616045 615 ntBASIC5.98□□□□□ -1.45
USP41Q3LFD5 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
USP41Q3LFD5 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.98□□□□□ -1.45
USP41Q3LFD5 PWAR1-201ENST00000624188 2414 ntBASIC5.98□□□□□ -1.45
USP41Q3LFD5 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
USP41Q3LFD5 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.98□□□□□ -1.45
USP41Q3LFD5 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
USP41Q3LFD5 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.98□□□□□ -1.45
USP41Q3LFD5 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
USP41Q3LFD5 OR51C1P-202ENST00000641159 1444 ntBASIC5.98□□□□□ -1.45
USP41Q3LFD5 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
USP41Q3LFD5 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.98□□□□□ -1.45
USP41Q3LFD5 AL929601.4-201ENST00000613011 1341 ntBASIC5.98□□□□□ -1.45
USP41Q3LFD5 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
USP41Q3LFD5 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
USP41Q3LFD5 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
USP41Q3LFD5 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
USP41Q3LFD5 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
USP41Q3LFD5 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.97□□□□□ -1.45
USP41Q3LFD5 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
USP41Q3LFD5 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
USP41Q3LFD5 AC022164.1-201ENST00000568767 2673 ntBASIC5.97□□□□□ -1.45
USP41Q3LFD5 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
USP41Q3LFD5 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
USP41Q3LFD5 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
USP41Q3LFD5 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
USP41Q3LFD5 RNA5SP183-201ENST00000362452 119 ntBASIC5.97□□□□□ -1.45
USP41Q3LFD5 SNORA58B-201ENST00000364259 136 ntBASIC5.97□□□□□ -1.45
USP41Q3LFD5 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.97□□□□□ -1.45
USP41Q3LFD5 AL139039.2-201ENST00000407436 479 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 211.3 ms