Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
SCN1BQ07699 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.12□□□□□ -1.59
SCN1BQ07699 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SCN1BQ07699 OR10R3P-201ENST00000361688 942 ntBASIC5.12□□□□□ -1.59
SCN1BQ07699 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.12□□□□□ -1.59
SCN1BQ07699 RNU1-136P-201ENST00000384181 164 ntBASIC5.12□□□□□ -1.59
SCN1BQ07699 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SCN1BQ07699 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SCN1BQ07699 AL132875.1-201ENST00000403623 949 ntBASIC5.12□□□□□ -1.59
SCN1BQ07699 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.12□□□□□ -1.59
SCN1BQ07699 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.12□□□□□ -1.59
SCN1BQ07699 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.12□□□□□ -1.59
SCN1BQ07699 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.12□□□□□ -1.59
SCN1BQ07699 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.12□□□□□ -1.59
SCN1BQ07699 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.12□□□□□ -1.59
SCN1BQ07699 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.12□□□□□ -1.59
SCN1BQ07699 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC5.12□□□□□ -1.59
SCN1BQ07699 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.12□□□□□ -1.59
SCN1BQ07699 LINC00328-2P-201ENST00000436585 219 ntBASIC5.12□□□□□ -1.59
SCN1BQ07699 AC092691.2-201ENST00000461787 803 ntBASIC5.12□□□□□ -1.59
SCN1BQ07699 H3F3AP5-201ENST00000475267 429 ntBASIC5.12□□□□□ -1.59
SCN1BQ07699 RPL12P30-201ENST00000488389 499 ntBASIC5.12□□□□□ -1.59
SCN1BQ07699 OR9N1P-202ENST00000494289 481 ntBASIC5.12□□□□□ -1.59
SCN1BQ07699 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.12□□□□□ -1.59
SCN1BQ07699 SUMO1P1-201ENST00000497904 306 ntBASIC5.12□□□□□ -1.59
SCN1BQ07699 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SCN1BQ07699 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SCN1BQ07699 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.12□□□□□ -1.59
SCN1BQ07699 SNORA74.1-201ENST00000516320 180 ntBASIC5.12□□□□□ -1.59
SCN1BQ07699 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC5.12□□□□□ -1.59
SCN1BQ07699 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.12□□□□□ -1.59
SCN1BQ07699 OR56A7P-201ENST00000524865 941 ntBASIC5.12□□□□□ -1.59
SCN1BQ07699 OR4A17P-201ENST00000526032 904 ntBASIC5.12□□□□□ -1.59
SCN1BQ07699 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
SCN1BQ07699 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.12□□□□□ -1.59
SCN1BQ07699 AC068305.2-201ENST00000550567 1205 ntBASIC5.12□□□□□ -1.59
SCN1BQ07699 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.12□□□□□ -1.59
SCN1BQ07699 AL731537.2-201ENST00000561565 951 ntBASIC5.12□□□□□ -1.59
SCN1BQ07699 AC106730.2-201ENST00000566641 540 ntBASIC5.12□□□□□ -1.59
SCN1BQ07699 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.12□□□□□ -1.59
SCN1BQ07699 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.12□□□□□ -1.59
SCN1BQ07699 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.12□□□□□ -1.59
SCN1BQ07699 AP001823.1-201ENST00000604056 1003 ntBASIC5.12□□□□□ -1.59
SCN1BQ07699 NANOGP3-201ENST00000605855 286 ntBASIC5.12□□□□□ -1.59
SCN1BQ07699 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.12□□□□□ -1.59
SCN1BQ07699 AC103703.1-201ENST00000634783 663 ntBASIC5.12□□□□□ -1.59
SCN1BQ07699 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
SCN1BQ07699 AL138820.1-201ENST00000617901 5305 ntBASIC5.12□□□□□ -1.59
SCN1BQ07699 AL359715.4-201ENST00000606629 1436 ntBASIC5.12□□□□□ -1.59
SCN1BQ07699 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.12□□□□□ -1.59
SCN1BQ07699 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.12□□□□□ -1.59
SCN1BQ07699 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SCN1BQ07699 AC018717.1-201ENST00000457712 1505 ntBASIC5.12□□□□□ -1.59
SCN1BQ07699 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SCN1BQ07699 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SCN1BQ07699 AC079298.1-201ENST00000625026 1619 ntBASIC5.12□□□□□ -1.59
SCN1BQ07699 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
SCN1BQ07699 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.12□□□□□ -1.59
SCN1BQ07699 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SCN1BQ07699 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
SCN1BQ07699 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.11□□□□□ -1.59
SCN1BQ07699 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.11□□□□□ -1.59
SCN1BQ07699 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SCN1BQ07699 AC104623.2-202ENST00000623477 4002 ntBASIC5.11□□□□□ -1.59
SCN1BQ07699 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
SCN1BQ07699 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SCN1BQ07699 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.11□□□□□ -1.59
SCN1BQ07699 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SCN1BQ07699 RNU6-666P-201ENST00000363499 107 ntBASIC5.11□□□□□ -1.59
SCN1BQ07699 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.11□□□□□ -1.59
SCN1BQ07699 MIR191-201ENST00000384873 92 ntBASIC5.11□□□□□ -1.59
SCN1BQ07699 MIR188-201ENST00000385034 86 ntBASIC5.11□□□□□ -1.59
SCN1BQ07699 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.11□□□□□ -1.59
SCN1BQ07699 AL133260.1-201ENST00000405720 405 ntBASIC5.11□□□□□ -1.59
SCN1BQ07699 AL096829.1-201ENST00000413677 457 ntBASIC5.11□□□□□ -1.59
SCN1BQ07699 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.11□□□□□ -1.59
SCN1BQ07699 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.11□□□□□ -1.59
SCN1BQ07699 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC5.11□□□□□ -1.59
SCN1BQ07699 DPY19L1P2-201ENST00000426647 915 ntBASIC5.11□□□□□ -1.59
SCN1BQ07699 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
SCN1BQ07699 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.11□□□□□ -1.59
SCN1BQ07699 XKRY2-201ENST00000442362 1093 ntBASIC5.11□□□□□ -1.59
SCN1BQ07699 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.11□□□□□ -1.59
SCN1BQ07699 MTND5P8-201ENST00000449817 1083 ntBASIC5.11□□□□□ -1.59
SCN1BQ07699 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.11□□□□□ -1.59
SCN1BQ07699 AC089999.1-201ENST00000460336 374 ntBASIC5.11□□□□□ -1.59
SCN1BQ07699 AP002453.1-201ENST00000492327 668 ntBASIC5.11□□□□□ -1.59
SCN1BQ07699 SNRPCP11-201ENST00000492453 205 ntBASIC5.11□□□□□ -1.59
SCN1BQ07699 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.11□□□□□ -1.59
SCN1BQ07699 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.11□□□□□ -1.59
SCN1BQ07699 RNU6-513P-201ENST00000516104 104 ntBASIC5.11□□□□□ -1.59
SCN1BQ07699 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SCN1BQ07699 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.11□□□□□ -1.59
SCN1BQ07699 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.11□□□□□ -1.59
SCN1BQ07699 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.11□□□□□ -1.59
SCN1BQ07699 MIR3157-201ENST00000578688 85 ntBASIC5.11□□□□□ -1.59
SCN1BQ07699 WBP1LP12-201ENST00000604449 331 ntBASIC5.11□□□□□ -1.59
SCN1BQ07699 NQO2-209ENST00000606474 470 ntTSL 3 BASIC5.11□□□□□ -1.59
SCN1BQ07699 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SCN1BQ07699 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms