Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.1□□□□□ -1.75
CCL20P78556 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.1□□□□□ -1.75
CCL20P78556 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.1□□□□□ -1.75
CCL20P78556 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCL20P78556 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CCL20P78556 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCL20P78556 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.09□□□□□ -1.75
CCL20P78556 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
CCL20P78556 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCL20P78556 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.09□□□□□ -1.75
CCL20P78556 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
CCL20P78556 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCL20P78556 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCL20P78556 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCL20P78556 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
CCL20P78556 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CCL20P78556 SNORA64.3-201ENST00000365647 134 ntBASIC4.09□□□□□ -1.75
CCL20P78556 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CCL20P78556 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC4.09□□□□□ -1.75
CCL20P78556 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.09□□□□□ -1.75
CCL20P78556 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC4.09□□□□□ -1.75
CCL20P78556 RPL12P17-201ENST00000432393 498 ntBASIC4.09□□□□□ -1.75
CCL20P78556 AC092447.2-201ENST00000435487 669 ntBASIC4.09□□□□□ -1.75
CCL20P78556 UBQLN1P1-207ENST00000441056 1169 ntBASIC4.09□□□□□ -1.75
CCL20P78556 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.09□□□□□ -1.75
CCL20P78556 AL158214.1-201ENST00000444423 404 ntBASIC4.09□□□□□ -1.75
CCL20P78556 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCL20P78556 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCL20P78556 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCL20P78556 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC4.09□□□□□ -1.75
CCL20P78556 CYCSP34-201ENST00000458172 304 ntBASIC4.09□□□□□ -1.75
CCL20P78556 AL122020.1-201ENST00000472287 459 ntBASIC4.09□□□□□ -1.75
CCL20P78556 RN7SL267P-201ENST00000485107 261 ntBASIC4.09□□□□□ -1.75
CCL20P78556 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC4.09□□□□□ -1.75
CCL20P78556 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC4.09□□□□□ -1.75
CCL20P78556 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.09□□□□□ -1.75
CCL20P78556 HMGB1P19-201ENST00000517578 577 ntBASIC4.09□□□□□ -1.75
CCL20P78556 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC4.09□□□□□ -1.75
CCL20P78556 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
CCL20P78556 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC4.09□□□□□ -1.75
CCL20P78556 MINCR-206ENST00000524335 499 ntTSL 2 BASIC4.09□□□□□ -1.75
CCL20P78556 AP004607.2-201ENST00000533949 322 ntBASIC4.09□□□□□ -1.75
CCL20P78556 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC4.09□□□□□ -1.75
CCL20P78556 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.09□□□□□ -1.75
CCL20P78556 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC4.09□□□□□ -1.75
CCL20P78556 AC090236.2-201ENST00000587933 1101 ntBASIC4.09□□□□□ -1.75
CCL20P78556 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC4.09□□□□□ -1.75
CCL20P78556 IMMP1LP1-201ENST00000605170 488 ntBASIC4.09□□□□□ -1.75
CCL20P78556 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.09□□□□□ -1.75
CCL20P78556 AC108673.3-201ENST00000609183 335 ntBASIC4.09□□□□□ -1.75
CCL20P78556 AC004801.6-201ENST00000616571 978 ntBASIC4.09□□□□□ -1.75
CCL20P78556 REV3L-214ENST00000619481 969 ntTSL 5 BASIC4.09□□□□□ -1.75
CCL20P78556 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.09□□□□□ -1.75
CCL20P78556 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.09□□□□□ -1.75
CCL20P78556 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CCL20P78556 AC097461.1-201ENST00000568928 2821 ntBASIC4.09□□□□□ -1.75
CCL20P78556 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCL20P78556 RBPJP2-201ENST00000618187 1444 ntBASIC4.09□□□□□ -1.75
CCL20P78556 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCL20P78556 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
CCL20P78556 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.09□□□□□ -1.76
CCL20P78556 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CCL20P78556 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
CCL20P78556 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.09□□□□□ -1.76
CCL20P78556 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
CCL20P78556 DDX18P6-201ENST00000450119 1997 ntBASIC4.09□□□□□ -1.76
CCL20P78556 AC007342.5-201ENST00000571340 2142 ntBASIC4.09□□□□□ -1.76
CCL20P78556 SCARNA15-201ENST00000607520 4325 ntBASIC4.09□□□□□ -1.76
CCL20P78556 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.08□□□□□ -1.76
CCL20P78556 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.08□□□□□ -1.76
CCL20P78556 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CCL20P78556 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCL20P78556 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.08□□□□□ -1.76
CCL20P78556 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CCL20P78556 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CCL20P78556 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCL20P78556 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC4.08□□□□□ -1.76
CCL20P78556 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCL20P78556 RNA5SP279-201ENST00000365513 117 ntBASIC4.08□□□□□ -1.76
CCL20P78556 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.08□□□□□ -1.76
CCL20P78556 AL390316.1-201ENST00000406279 553 ntBASIC4.08□□□□□ -1.76
CCL20P78556 RN7SKP146-201ENST00000410242 334 ntBASIC4.08□□□□□ -1.76
CCL20P78556 OR52N3P-201ENST00000413417 934 ntBASIC4.08□□□□□ -1.76
CCL20P78556 TMBIM7P-201ENST00000418074 855 ntBASIC4.08□□□□□ -1.76
CCL20P78556 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC4.08□□□□□ -1.76
CCL20P78556 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.08□□□□□ -1.76
CCL20P78556 AL139148.1-201ENST00000427122 680 ntBASIC4.08□□□□□ -1.76
CCL20P78556 VN1R110P-201ENST00000438988 971 ntBASIC4.08□□□□□ -1.76
CCL20P78556 WDR82P2-201ENST00000444540 928 ntBASIC4.08□□□□□ -1.76
CCL20P78556 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC4.08□□□□□ -1.76
CCL20P78556 AP000547.1-201ENST00000454360 617 ntBASIC4.08□□□□□ -1.76
CCL20P78556 AC093166.2-201ENST00000455969 1017 ntBASIC4.08□□□□□ -1.76
CCL20P78556 TFP1-201ENST00000460564 572 ntTSL 4 BASIC4.08□□□□□ -1.76
CCL20P78556 GYG1P1-201ENST00000460864 698 ntBASIC4.08□□□□□ -1.76
CCL20P78556 RN7SL189P-201ENST00000468631 289 ntBASIC4.08□□□□□ -1.76
CCL20P78556 RPS3AP15-201ENST00000483874 781 ntBASIC4.08□□□□□ -1.76
CCL20P78556 TFP1-203ENST00000490470 561 ntTSL 4 BASIC4.08□□□□□ -1.76
CCL20P78556 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CCL20P78556 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC4.08□□□□□ -1.76
CCL20P78556 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms