Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC4.59□□□□□ -1.67
LMO4P61968 OR5M14P-201ENST00000506803 618 ntBASIC4.59□□□□□ -1.67
LMO4P61968 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC4.59□□□□□ -1.67
LMO4P61968 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.59□□□□□ -1.67
LMO4P61968 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.59□□□□□ -1.67
LMO4P61968 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.59□□□□□ -1.67
LMO4P61968 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.59□□□□□ -1.67
LMO4P61968 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.59□□□□□ -1.67
LMO4P61968 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC4.59□□□□□ -1.67
LMO4P61968 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.59□□□□□ -1.67
LMO4P61968 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.59□□□□□ -1.67
LMO4P61968 AC119501.1-201ENST00000603646 475 ntBASIC4.59□□□□□ -1.67
LMO4P61968 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.59□□□□□ -1.67
LMO4P61968 WBP1LP8-201ENST00000617401 327 ntBASIC4.59□□□□□ -1.67
LMO4P61968 AC022306.3-201ENST00000619930 550 ntBASIC4.59□□□□□ -1.67
LMO4P61968 AC097520.1-201ENST00000624435 385 ntBASIC4.59□□□□□ -1.67
LMO4P61968 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC4.59□□□□□ -1.68
LMO4P61968 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC4.59□□□□□ -1.68
LMO4P61968 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC4.59□□□□□ -1.68
LMO4P61968 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
LMO4P61968 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC4.58□□□□□ -1.68
LMO4P61968 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
LMO4P61968 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.58□□□□□ -1.68
LMO4P61968 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LMO4P61968 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LMO4P61968 OFD1P17-201ENST00000437639 3018 ntBASIC4.58□□□□□ -1.68
LMO4P61968 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.58□□□□□ -1.68
LMO4P61968 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LMO4P61968 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
LMO4P61968 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC4.58□□□□□ -1.68
LMO4P61968 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LMO4P61968 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.58□□□□□ -1.68
LMO4P61968 SNORA58B-201ENST00000364259 136 ntBASIC4.58□□□□□ -1.68
LMO4P61968 RNU1-59P-201ENST00000364829 162 ntBASIC4.58□□□□□ -1.68
LMO4P61968 GNG5P2-201ENST00000372054 207 ntBASIC4.58□□□□□ -1.68
LMO4P61968 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
LMO4P61968 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.58□□□□□ -1.68
LMO4P61968 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LMO4P61968 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC4.58□□□□□ -1.68
LMO4P61968 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.58□□□□□ -1.68
LMO4P61968 AL590762.3-201ENST00000436372 640 ntBASIC4.58□□□□□ -1.68
LMO4P61968 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.58□□□□□ -1.68
LMO4P61968 EEF1B2P5-201ENST00000444820 548 ntBASIC4.58□□□□□ -1.68
LMO4P61968 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.58□□□□□ -1.68
LMO4P61968 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC4.58□□□□□ -1.68
LMO4P61968 AC005532.2-201ENST00000467154 373 ntBASIC4.58□□□□□ -1.68
LMO4P61968 AGGF1P3-201ENST00000493675 1213 ntBASIC4.58□□□□□ -1.68
LMO4P61968 AC104629.1-201ENST00000494226 508 ntBASIC4.58□□□□□ -1.68
LMO4P61968 AC072052.1-201ENST00000496556 306 ntBASIC4.58□□□□□ -1.68
LMO4P61968 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
LMO4P61968 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.58□□□□□ -1.68
LMO4P61968 RN7SKP253-201ENST00000516424 309 ntBASIC4.58□□□□□ -1.68
LMO4P61968 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4.58□□□□□ -1.68
LMO4P61968 PMS2P3-207ENST00000529061 717 ntBASIC4.58□□□□□ -1.68
LMO4P61968 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC4.58□□□□□ -1.68
LMO4P61968 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC4.58□□□□□ -1.68
LMO4P61968 AC137627.1-201ENST00000545761 289 ntBASIC4.58□□□□□ -1.68
LMO4P61968 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC4.58□□□□□ -1.68
LMO4P61968 HAUS8P1-201ENST00000549005 542 ntBASIC4.58□□□□□ -1.68
LMO4P61968 AL136520.1-202ENST00000555494 763 ntBASIC4.58□□□□□ -1.68
LMO4P61968 AC044860.2-201ENST00000561005 179 ntBASIC4.58□□□□□ -1.68
LMO4P61968 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.58□□□□□ -1.68
LMO4P61968 H3F3BP2-201ENST00000583907 357 ntBASIC4.58□□□□□ -1.68
LMO4P61968 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.58□□□□□ -1.68
LMO4P61968 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.58□□□□□ -1.68
LMO4P61968 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.58□□□□□ -1.68
LMO4P61968 AC026979.4-201ENST00000606555 645 ntBASIC4.58□□□□□ -1.68
LMO4P61968 AC018754.1-201ENST00000607486 925 ntBASIC4.58□□□□□ -1.68
LMO4P61968 OR7M1P-201ENST00000608946 533 ntBASIC4.58□□□□□ -1.68
LMO4P61968 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.58□□□□□ -1.68
LMO4P61968 AC117490.2-201ENST00000610042 594 ntBASIC4.58□□□□□ -1.68
LMO4P61968 U1.25-201ENST00000614085 162 ntBASIC4.58□□□□□ -1.68
LMO4P61968 U1.34-201ENST00000618578 162 ntBASIC4.58□□□□□ -1.68
LMO4P61968 U1.31-201ENST00000620022 160 ntBASIC4.58□□□□□ -1.68
LMO4P61968 AL139254.3-201ENST00000641097 674 ntBASIC4.58□□□□□ -1.68
LMO4P61968 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LMO4P61968 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC4.58□□□□□ -1.68
LMO4P61968 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
LMO4P61968 AC068769.1-201ENST00000474767 2426 ntBASIC4.58□□□□□ -1.68
LMO4P61968 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
LMO4P61968 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
LMO4P61968 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LMO4P61968 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LMO4P61968 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC4.58□□□□□ -1.68
LMO4P61968 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LMO4P61968 AC018809.2-201ENST00000602436 3823 ntBASIC4.58□□□□□ -1.68
LMO4P61968 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
LMO4P61968 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LMO4P61968 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
LMO4P61968 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.58□□□□□ -1.68
LMO4P61968 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LMO4P61968 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC4.57□□□□□ -1.68
LMO4P61968 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LMO4P61968 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LMO4P61968 NLN-202ENST00000502464 8354 ntTSL 5 BASIC4.57□□□□□ -1.68
LMO4P61968 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
LMO4P61968 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC4.57□□□□□ -1.68
LMO4P61968 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC4.57□□□□□ -1.68
LMO4P61968 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
LMO4P61968 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 149.5 ms