Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
EPHB3P54753 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.63□□□□□ -1.35
EPHB3P54753 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
EPHB3P54753 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
EPHB3P54753 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.63□□□□□ -1.35
EPHB3P54753 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
EPHB3P54753 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.62□□□□□ -1.35
EPHB3P54753 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
EPHB3P54753 AC092821.2-201ENST00000545710 2042 ntBASIC6.62□□□□□ -1.35
EPHB3P54753 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
EPHB3P54753 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
EPHB3P54753 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.62□□□□□ -1.35
EPHB3P54753 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.62□□□□□ -1.35
EPHB3P54753 SLC10A5P1-201ENST00000379063 1306 ntBASIC6.62□□□□□ -1.35
EPHB3P54753 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
EPHB3P54753 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
EPHB3P54753 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
EPHB3P54753 LCN1P2-201ENST00000372030 223 ntBASIC6.62□□□□□ -1.35
EPHB3P54753 TANK-206ENST00000406287 875 ntTSL 5 BASIC6.62□□□□□ -1.35
EPHB3P54753 RN7SKP121-201ENST00000410842 305 ntBASIC6.62□□□□□ -1.35
EPHB3P54753 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.62□□□□□ -1.35
EPHB3P54753 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC6.62□□□□□ -1.35
EPHB3P54753 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC6.62□□□□□ -1.35
EPHB3P54753 RPF2P1-201ENST00000424137 906 ntBASIC6.62□□□□□ -1.35
EPHB3P54753 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC6.62□□□□□ -1.35
EPHB3P54753 TAF9P1-201ENST00000445421 515 ntBASIC6.62□□□□□ -1.35
EPHB3P54753 MTCYBP3-201ENST00000445588 1137 ntBASIC6.62□□□□□ -1.35
EPHB3P54753 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.62□□□□□ -1.35
EPHB3P54753 AL589880.1-201ENST00000448271 287 ntBASIC6.62□□□□□ -1.35
EPHB3P54753 OR52Y1P-201ENST00000452418 828 ntBASIC6.62□□□□□ -1.35
EPHB3P54753 MRPL35P4-201ENST00000453682 566 ntBASIC6.62□□□□□ -1.35
EPHB3P54753 TAF9P2-201ENST00000454958 515 ntBASIC6.62□□□□□ -1.35
EPHB3P54753 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.62□□□□□ -1.35
EPHB3P54753 RPL6P9-201ENST00000466502 859 ntBASIC6.62□□□□□ -1.35
EPHB3P54753 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.62□□□□□ -1.35
EPHB3P54753 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC6.62□□□□□ -1.35
EPHB3P54753 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC6.62□□□□□ -1.35
EPHB3P54753 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC6.62□□□□□ -1.35
EPHB3P54753 HMGB1P47-201ENST00000511281 589 ntBASIC6.62□□□□□ -1.35
EPHB3P54753 AC119751.1-201ENST00000513357 765 ntBASIC6.62□□□□□ -1.35
EPHB3P54753 AC092593.2-201ENST00000513866 913 ntBASIC6.62□□□□□ -1.35
EPHB3P54753 RN7SKP248-201ENST00000516278 305 ntBASIC6.62□□□□□ -1.35
EPHB3P54753 RNU6-720P-201ENST00000516363 108 ntBASIC6.62□□□□□ -1.35
EPHB3P54753 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.62□□□□□ -1.35
EPHB3P54753 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC6.62□□□□□ -1.35
EPHB3P54753 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.62□□□□□ -1.35
EPHB3P54753 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.62□□□□□ -1.35
EPHB3P54753 AC109635.3-201ENST00000529536 185 ntBASIC6.62□□□□□ -1.35
EPHB3P54753 TRIM51DP-201ENST00000529746 596 ntBASIC6.62□□□□□ -1.35
EPHB3P54753 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC6.62□□□□□ -1.35
EPHB3P54753 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC6.62□□□□□ -1.35
EPHB3P54753 AC027281.1-201ENST00000574178 758 ntBASIC6.62□□□□□ -1.35
EPHB3P54753 AC097467.4-201ENST00000605504 141 ntBASIC6.62□□□□□ -1.35
EPHB3P54753 AC024060.1-201ENST00000607052 494 ntBASIC6.62□□□□□ -1.35
EPHB3P54753 AL450489.1-201ENST00000612071 468 ntBASIC6.62□□□□□ -1.35
EPHB3P54753 AL096712.1-201ENST00000614561 159 ntBASIC6.62□□□□□ -1.35
EPHB3P54753 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC6.62□□□□□ -1.35
EPHB3P54753 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
EPHB3P54753 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
EPHB3P54753 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.62□□□□□ -1.35
EPHB3P54753 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
EPHB3P54753 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
EPHB3P54753 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
EPHB3P54753 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC6.62□□□□□ -1.35
EPHB3P54753 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
EPHB3P54753 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
EPHB3P54753 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
EPHB3P54753 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
EPHB3P54753 AL353763.1-201ENST00000624467 1628 ntBASIC6.61□□□□□ -1.35
EPHB3P54753 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
EPHB3P54753 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.61□□□□□ -1.35
EPHB3P54753 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.61□□□□□ -1.35
EPHB3P54753 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
EPHB3P54753 AC139426.3-201ENST00000605648 2059 ntBASIC6.61□□□□□ -1.35
EPHB3P54753 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
EPHB3P54753 FO082842.1-201ENST00000423552 1370 ntBASIC6.61□□□□□ -1.35
EPHB3P54753 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
EPHB3P54753 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
EPHB3P54753 AC107980.1-201ENST00000558671 3355 ntBASIC6.61□□□□□ -1.35
EPHB3P54753 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
EPHB3P54753 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
EPHB3P54753 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
EPHB3P54753 RN7SKP269-201ENST00000365545 319 ntBASIC6.61□□□□□ -1.35
EPHB3P54753 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
EPHB3P54753 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC6.61□□□□□ -1.35
EPHB3P54753 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
EPHB3P54753 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
EPHB3P54753 AC130360.1-201ENST00000425489 1117 ntBASIC6.61□□□□□ -1.35
EPHB3P54753 AC124944.2-201ENST00000429866 1242 ntBASIC6.61□□□□□ -1.35
EPHB3P54753 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
EPHB3P54753 ATP5LP2-201ENST00000440646 311 ntBASIC6.61□□□□□ -1.35
EPHB3P54753 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.61□□□□□ -1.35
EPHB3P54753 MORF4-201ENST00000447135 971 ntBASIC6.61□□□□□ -1.35
EPHB3P54753 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
EPHB3P54753 OSTCP1-201ENST00000455507 450 ntBASIC6.61□□□□□ -1.35
EPHB3P54753 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.61□□□□□ -1.35
EPHB3P54753 MTCO1P31-201ENST00000506355 492 ntBASIC6.61□□□□□ -1.35
EPHB3P54753 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.61□□□□□ -1.35
EPHB3P54753 AC130365.2-201ENST00000525882 1201 ntBASIC6.61□□□□□ -1.35
EPHB3P54753 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms