Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CXCL12P48061 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.39□□□□□ -1.55
CXCL12P48061 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CXCL12P48061 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.39□□□□□ -1.55
CXCL12P48061 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CXCL12P48061 WBP11P1-201ENST00000562560 1931 ntBASIC5.38□□□□□ -1.55
CXCL12P48061 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CXCL12P48061 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CXCL12P48061 AL078621.3-201ENST00000623707 2042 ntBASIC5.38□□□□□ -1.55
CXCL12P48061 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CXCL12P48061 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.38□□□□□ -1.55
CXCL12P48061 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CXCL12P48061 DPY19L1P1-201ENST00000417811 2594 ntBASIC5.38□□□□□ -1.55
CXCL12P48061 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CXCL12P48061 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CXCL12P48061 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CXCL12P48061 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CXCL12P48061 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CXCL12P48061 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CXCL12P48061 RN7SKP149-201ENST00000363008 344 ntBASIC5.38□□□□□ -1.55
CXCL12P48061 RNA5SP326-201ENST00000363209 110 ntBASIC5.38□□□□□ -1.55
CXCL12P48061 RNA5SP87-201ENST00000384155 118 ntBASIC5.38□□□□□ -1.55
CXCL12P48061 AL590139.1-201ENST00000416267 400 ntBASIC5.38□□□□□ -1.55
CXCL12P48061 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.38□□□□□ -1.55
CXCL12P48061 AC091390.1-201ENST00000433904 331 ntBASIC5.38□□□□□ -1.55
CXCL12P48061 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.38□□□□□ -1.55
CXCL12P48061 AL138878.2-201ENST00000440581 1241 ntBASIC5.38□□□□□ -1.55
CXCL12P48061 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.38□□□□□ -1.55
CXCL12P48061 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.38□□□□□ -1.55
CXCL12P48061 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.38□□□□□ -1.55
CXCL12P48061 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.38□□□□□ -1.55
CXCL12P48061 RPL37AP8-201ENST00000494116 276 ntBASIC5.38□□□□□ -1.55
CXCL12P48061 AC109464.1-201ENST00000511091 819 ntBASIC5.38□□□□□ -1.55
CXCL12P48061 RN7SKP98-201ENST00000517070 156 ntBASIC5.38□□□□□ -1.55
CXCL12P48061 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.38□□□□□ -1.55
CXCL12P48061 AC137627.1-201ENST00000545761 289 ntBASIC5.38□□□□□ -1.55
CXCL12P48061 AC018552.1-201ENST00000562099 811 ntBASIC5.38□□□□□ -1.55
CXCL12P48061 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.38□□□□□ -1.55
CXCL12P48061 AC112694.2-201ENST00000623697 768 ntBASIC5.38□□□□□ -1.55
CXCL12P48061 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CXCL12P48061 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CXCL12P48061 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CXCL12P48061 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.38□□□□□ -1.55
CXCL12P48061 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CXCL12P48061 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.38□□□□□ -1.55
CXCL12P48061 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CXCL12P48061 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CXCL12P48061 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CXCL12P48061 ZNF969P-201ENST00000510345 2341 ntBASIC5.37□□□□□ -1.55
CXCL12P48061 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CXCL12P48061 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CXCL12P48061 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CXCL12P48061 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CXCL12P48061 AC068870.1-201ENST00000563737 2455 ntBASIC5.37□□□□□ -1.55
CXCL12P48061 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CXCL12P48061 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CXCL12P48061 MIPEPP2-201ENST00000422560 1819 ntBASIC5.37□□□□□ -1.55
CXCL12P48061 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.37□□□□□ -1.55
CXCL12P48061 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.37□□□□□ -1.55
CXCL12P48061 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC5.37□□□□□ -1.55
CXCL12P48061 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CXCL12P48061 AL121886.1-201ENST00000358609 435 ntBASIC5.37□□□□□ -1.55
CXCL12P48061 RNVU1-6-201ENST00000364688 164 ntBASIC5.37□□□□□ -1.55
CXCL12P48061 AL353625.1-202ENST00000366273 571 ntBASIC5.37□□□□□ -1.55
CXCL12P48061 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CXCL12P48061 RNU6-316P-201ENST00000391027 107 ntBASIC5.37□□□□□ -1.55
CXCL12P48061 GAPDHP15-201ENST00000398586 975 ntBASIC5.37□□□□□ -1.55
CXCL12P48061 RPSAP35-201ENST00000413753 818 ntBASIC5.37□□□□□ -1.55
CXCL12P48061 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CXCL12P48061 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.37□□□□□ -1.55
CXCL12P48061 VDAC1P6-201ENST00000430062 855 ntBASIC5.37□□□□□ -1.55
CXCL12P48061 AC008072.1-201ENST00000434254 824 ntBASIC5.37□□□□□ -1.55
CXCL12P48061 AL590399.4-201ENST00000436561 601 ntBASIC5.37□□□□□ -1.55
CXCL12P48061 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.37□□□□□ -1.55
CXCL12P48061 AC073072.2-201ENST00000447425 348 ntBASIC5.37□□□□□ -1.55
CXCL12P48061 NDUFA5P9-201ENST00000472609 340 ntBASIC5.37□□□□□ -1.55
CXCL12P48061 AC092754.1-201ENST00000472975 479 ntBASIC5.37□□□□□ -1.55
CXCL12P48061 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.37□□□□□ -1.55
CXCL12P48061 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.37□□□□□ -1.55
CXCL12P48061 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CXCL12P48061 OR5AM1P-201ENST00000532136 1032 ntBASIC5.37□□□□□ -1.55
CXCL12P48061 AC008033.2-201ENST00000542626 177 ntBASIC5.37□□□□□ -1.55
CXCL12P48061 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.37□□□□□ -1.55
CXCL12P48061 AC234771.5-201ENST00000600161 514 ntBASIC5.37□□□□□ -1.55
CXCL12P48061 AP000346.3-201ENST00000622821 210 ntBASIC5.37□□□□□ -1.55
CXCL12P48061 AC015660.5-201ENST00000623238 564 ntBASIC5.37□□□□□ -1.55
CXCL12P48061 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC5.37□□□□□ -1.55
CXCL12P48061 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CXCL12P48061 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.37□□□□□ -1.55
CXCL12P48061 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CXCL12P48061 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CXCL12P48061 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.37□□□□□ -1.55
CXCL12P48061 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CXCL12P48061 AC022164.1-201ENST00000568767 2673 ntBASIC5.37□□□□□ -1.55
CXCL12P48061 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
CXCL12P48061 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CXCL12P48061 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CXCL12P48061 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.36□□□□□ -1.55
CXCL12P48061 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.36□□□□□ -1.55
CXCL12P48061 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms