Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.1□□□□□ -1.59
RFC3P40938 AC136428.4-201ENST00000634254 1155 ntBASIC5.1□□□□□ -1.59
RFC3P40938 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.1□□□□□ -1.59
RFC3P40938 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.1□□□□□ -1.59
RFC3P40938 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.1□□□□□ -1.59
RFC3P40938 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RFC3P40938 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.1□□□□□ -1.59
RFC3P40938 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RFC3P40938 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RFC3P40938 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
RFC3P40938 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
RFC3P40938 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
RFC3P40938 AP001029.2-203ENST00000589795 4910 ntBASIC5.09□□□□□ -1.59
RFC3P40938 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RFC3P40938 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
RFC3P40938 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RFC3P40938 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
RFC3P40938 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RFC3P40938 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
RFC3P40938 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RFC3P40938 MTCO1P7-201ENST00000419523 1542 ntBASIC5.09□□□□□ -1.59
RFC3P40938 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.59
RFC3P40938 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RFC3P40938 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RFC3P40938 AC009804.1-201ENST00000400949 179 ntBASIC5.09□□□□□ -1.59
RFC3P40938 DPPA2P3-201ENST00000411853 655 ntBASIC5.09□□□□□ -1.59
RFC3P40938 AP000534.2-201ENST00000412729 568 ntBASIC5.09□□□□□ -1.59
RFC3P40938 CRIP1P1-201ENST00000427567 185 ntBASIC5.09□□□□□ -1.59
RFC3P40938 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.09□□□□□ -1.59
RFC3P40938 CYCSP12-201ENST00000437729 300 ntBASIC5.09□□□□□ -1.59
RFC3P40938 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.09□□□□□ -1.59
RFC3P40938 MYO5BP2-201ENST00000449815 1277 ntBASIC5.09□□□□□ -1.59
RFC3P40938 AC011225.1-201ENST00000457751 369 ntBASIC5.09□□□□□ -1.59
RFC3P40938 AC114982.2-201ENST00000461396 358 ntBASIC5.09□□□□□ -1.59
RFC3P40938 RN7SL799P-201ENST00000475891 298 ntBASIC5.09□□□□□ -1.59
RFC3P40938 OR2AO1P-201ENST00000476497 403 ntBASIC5.09□□□□□ -1.59
RFC3P40938 AC112184.1-201ENST00000505179 312 ntBASIC5.09□□□□□ -1.59
RFC3P40938 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.09□□□□□ -1.59
RFC3P40938 RNA5SP230-201ENST00000517039 122 ntBASIC5.09□□□□□ -1.59
RFC3P40938 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.09□□□□□ -1.59
RFC3P40938 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.09□□□□□ -1.59
RFC3P40938 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.09□□□□□ -1.59
RFC3P40938 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.09□□□□□ -1.59
RFC3P40938 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.09□□□□□ -1.59
RFC3P40938 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.09□□□□□ -1.59
RFC3P40938 AC012616.1-201ENST00000600294 197 ntBASIC5.09□□□□□ -1.59
RFC3P40938 AL021707.7-201ENST00000607991 416 ntBASIC5.09□□□□□ -1.59
RFC3P40938 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RFC3P40938 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
RFC3P40938 AC079776.5-201ENST00000641920 211 ntBASIC5.09□□□□□ -1.59
RFC3P40938 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RFC3P40938 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
RFC3P40938 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.09□□□□□ -1.6
RFC3P40938 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.09□□□□□ -1.6
RFC3P40938 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RFC3P40938 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RFC3P40938 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RFC3P40938 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
RFC3P40938 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.08□□□□□ -1.6
RFC3P40938 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.08□□□□□ -1.6
RFC3P40938 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
RFC3P40938 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
RFC3P40938 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
RFC3P40938 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RFC3P40938 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
RFC3P40938 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.08□□□□□ -1.6
RFC3P40938 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.08□□□□□ -1.6
RFC3P40938 RPL7L1P9-201ENST00000431298 745 ntBASIC5.08□□□□□ -1.6
RFC3P40938 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.08□□□□□ -1.6
RFC3P40938 OR6D1P-201ENST00000436165 939 ntBASIC5.08□□□□□ -1.6
RFC3P40938 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.08□□□□□ -1.6
RFC3P40938 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.08□□□□□ -1.6
RFC3P40938 RPL12P39-201ENST00000455456 496 ntBASIC5.08□□□□□ -1.6
RFC3P40938 RPS7P6-201ENST00000485777 579 ntBASIC5.08□□□□□ -1.6
RFC3P40938 EIF1P7-201ENST00000487533 337 ntBASIC5.08□□□□□ -1.6
RFC3P40938 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.08□□□□□ -1.6
RFC3P40938 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.08□□□□□ -1.6
RFC3P40938 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.08□□□□□ -1.6
RFC3P40938 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.08□□□□□ -1.6
RFC3P40938 AC021146.10-201ENST00000515628 706 ntBASIC5.08□□□□□ -1.6
RFC3P40938 RNA5SP92-201ENST00000516437 110 ntBASIC5.08□□□□□ -1.6
RFC3P40938 AL121594.2-201ENST00000541658 472 ntBASIC5.08□□□□□ -1.6
RFC3P40938 AC139697.1-201ENST00000548429 745 ntBASIC5.08□□□□□ -1.6
RFC3P40938 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.08□□□□□ -1.6
RFC3P40938 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.08□□□□□ -1.6
RFC3P40938 AL133481.2-203ENST00000607558 139 ntBASIC5.08□□□□□ -1.6
RFC3P40938 AC025574.2-201ENST00000615621 514 ntBASIC5.08□□□□□ -1.6
RFC3P40938 AC004808.2-201ENST00000627965 773 ntBASIC5.08□□□□□ -1.6
RFC3P40938 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
RFC3P40938 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
RFC3P40938 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RFC3P40938 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RFC3P40938 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
RFC3P40938 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
RFC3P40938 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
RFC3P40938 AC116158.1-201ENST00000560231 2129 ntBASIC5.08□□□□□ -1.6
RFC3P40938 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
RFC3P40938 AC019072.1-201ENST00000604535 1551 ntBASIC5.08□□□□□ -1.6
RFC3P40938 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RFC3P40938 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms