Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
CLIP1P30622 DMD-205ENST00000359836 7339 ntTSL 5 BASIC8.38□□□□□ -1.07
CLIP1P30622 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CLIP1P30622 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CLIP1P30622 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CLIP1P30622 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
CLIP1P30622 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC8.38□□□□□ -1.07
CLIP1P30622 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CLIP1P30622 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC8.38□□□□□ -1.07
CLIP1P30622 AC018765.1-201ENST00000623357 3446 ntBASIC8.38□□□□□ -1.07
CLIP1P30622 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC8.38□□□□□ -1.07
CLIP1P30622 OR9G4-201ENST00000302957 984 ntBASIC8.37□□□□□ -1.07
CLIP1P30622 MAX-203ENST00000341653 330 ntTSL 2 BASIC8.37□□□□□ -1.07
CLIP1P30622 MIR1182-201ENST00000408363 97 ntBASIC8.37□□□□□ -1.07
CLIP1P30622 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC8.37□□□□□ -1.07
CLIP1P30622 AC138761.5-201ENST00000433967 325 ntBASIC8.37□□□□□ -1.07
CLIP1P30622 AC002075.1-201ENST00000457396 676 ntBASIC8.37□□□□□ -1.07
CLIP1P30622 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC8.37□□□□□ -1.07
CLIP1P30622 AP000797.2-201ENST00000475768 606 ntBASIC8.37□□□□□ -1.07
CLIP1P30622 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC8.37□□□□□ -1.07
CLIP1P30622 AC006427.1-201ENST00000514359 712 ntBASIC8.37□□□□□ -1.07
CLIP1P30622 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC8.37□□□□□ -1.07
CLIP1P30622 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC8.37□□□□□ -1.07
CLIP1P30622 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC8.37□□□□□ -1.07
CLIP1P30622 AC104785.1-201ENST00000603220 588 ntBASIC8.37□□□□□ -1.07
CLIP1P30622 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC8.37□□□□□ -1.07
CLIP1P30622 AC091953.3-201ENST00000623220 236 ntBASIC8.37□□□□□ -1.07
CLIP1P30622 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC8.37□□□□□ -1.07
CLIP1P30622 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CLIP1P30622 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CLIP1P30622 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CLIP1P30622 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CLIP1P30622 MSL3P1-202ENST00000440028 1468 ntBASIC8.37□□□□□ -1.07
CLIP1P30622 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CLIP1P30622 HSPA8P15-201ENST00000401676 786 ntBASIC8.37□□□□□ -1.07
CLIP1P30622 AC093162.1-201ENST00000419682 124 ntBASIC8.37□□□□□ -1.07
CLIP1P30622 AC023271.1-201ENST00000445936 1090 ntBASIC8.37□□□□□ -1.07
CLIP1P30622 RPL7P41-201ENST00000485823 957 ntBASIC8.37□□□□□ -1.07
CLIP1P30622 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC8.37□□□□□ -1.07
CLIP1P30622 OR5AZ1P-201ENST00000527448 943 ntBASIC8.37□□□□□ -1.07
CLIP1P30622 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC8.37□□□□□ -1.07
CLIP1P30622 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC8.37□□□□□ -1.07
CLIP1P30622 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC8.36□□□□□ -1.07
CLIP1P30622 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC8.36□□□□□ -1.07
CLIP1P30622 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
CLIP1P30622 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
CLIP1P30622 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC8.36□□□□□ -1.07
CLIP1P30622 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
CLIP1P30622 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CLIP1P30622 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CLIP1P30622 AC092681.1-201ENST00000297369 291 ntBASIC8.36□□□□□ -1.07
CLIP1P30622 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC8.36□□□□□ -1.07
CLIP1P30622 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CLIP1P30622 SNORA70.6-201ENST00000383934 134 ntBASIC8.36□□□□□ -1.07
CLIP1P30622 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CLIP1P30622 AC211486.3-201ENST00000412694 621 ntBASIC8.36□□□□□ -1.07
CLIP1P30622 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC8.36□□□□□ -1.07
CLIP1P30622 DDX39BP1-205ENST00000422507 192 ntBASIC8.36□□□□□ -1.07
CLIP1P30622 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CLIP1P30622 AL359265.1-201ENST00000440296 795 ntBASIC8.36□□□□□ -1.07
CLIP1P30622 AC092647.3-201ENST00000443044 633 ntBASIC8.36□□□□□ -1.07
CLIP1P30622 Z80107.2-201ENST00000445127 392 ntBASIC8.36□□□□□ -1.07
CLIP1P30622 RPS3AP41-201ENST00000462701 778 ntBASIC8.36□□□□□ -1.07
CLIP1P30622 AC090058.1-201ENST00000498788 435 ntBASIC8.36□□□□□ -1.07
CLIP1P30622 IMPA1P1-201ENST00000510718 842 ntBASIC8.36□□□□□ -1.07
CLIP1P30622 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CLIP1P30622 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC8.36□□□□□ -1.07
CLIP1P30622 AC007786.3-201ENST00000615154 596 ntBASIC8.36□□□□□ -1.07
CLIP1P30622 MAPK6PS2-201ENST00000379571 2060 ntBASIC8.36□□□□□ -1.07
CLIP1P30622 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC8.36□□□□□ -1.07
CLIP1P30622 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CLIP1P30622 AC079298.1-201ENST00000625026 1619 ntBASIC8.35□□□□□ -1.07
CLIP1P30622 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC8.35□□□□□ -1.07
CLIP1P30622 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC8.35□□□□□ -1.07
CLIP1P30622 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC8.35□□□□□ -1.07
CLIP1P30622 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
CLIP1P30622 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
CLIP1P30622 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC8.35□□□□□ -1.07
CLIP1P30622 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CLIP1P30622 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CLIP1P30622 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CLIP1P30622 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
CLIP1P30622 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
CLIP1P30622 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CLIP1P30622 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC8.35□□□□□ -1.07
CLIP1P30622 SNORA56-201ENST00000383966 129 ntBASIC8.35□□□□□ -1.07
CLIP1P30622 MIR589-201ENST00000385238 99 ntBASIC8.35□□□□□ -1.07
CLIP1P30622 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC8.35□□□□□ -1.07
CLIP1P30622 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CLIP1P30622 AC090804.1-201ENST00000448870 490 ntBASIC8.35□□□□□ -1.07
CLIP1P30622 RN7SL591P-201ENST00000496150 292 ntBASIC8.35□□□□□ -1.07
CLIP1P30622 RPS24P16-201ENST00000497294 392 ntBASIC8.35□□□□□ -1.07
CLIP1P30622 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC8.35□□□□□ -1.07
CLIP1P30622 AC108043.1-201ENST00000512696 574 ntBASIC8.35□□□□□ -1.07
CLIP1P30622 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC8.35□□□□□ -1.07
CLIP1P30622 RN7SKP147-201ENST00000517154 244 ntBASIC8.35□□□□□ -1.07
CLIP1P30622 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC8.35□□□□□ -1.07
CLIP1P30622 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC8.35□□□□□ -1.07
CLIP1P30622 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC8.35□□□□□ -1.07
CLIP1P30622 AC015660.5-201ENST00000623238 564 ntBASIC8.35□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms