Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
MMP3P08254 RN7SKP216-201ENST00000411050 312 ntBASIC6.1□□□□□ -1.43
MMP3P08254 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC6.1□□□□□ -1.43
MMP3P08254 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC6.1□□□□□ -1.43
MMP3P08254 Z85994.2-201ENST00000434327 452 ntBASIC6.1□□□□□ -1.43
MMP3P08254 AC013410.1-201ENST00000436223 1232 ntBASIC6.1□□□□□ -1.43
MMP3P08254 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.1□□□□□ -1.43
MMP3P08254 AP000949.1-201ENST00000438328 629 ntBASIC6.1□□□□□ -1.43
MMP3P08254 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC6.1□□□□□ -1.43
MMP3P08254 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC6.1□□□□□ -1.43
MMP3P08254 AL672138.1-201ENST00000450604 1015 ntBASIC6.1□□□□□ -1.43
MMP3P08254 CYCSP53-201ENST00000455540 265 ntBASIC6.1□□□□□ -1.43
MMP3P08254 RPL7P6-201ENST00000480903 738 ntBASIC6.1□□□□□ -1.43
MMP3P08254 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC6.1□□□□□ -1.43
MMP3P08254 AC015864.1-201ENST00000496512 544 ntBASIC6.1□□□□□ -1.43
MMP3P08254 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC6.1□□□□□ -1.43
MMP3P08254 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.1□□□□□ -1.43
MMP3P08254 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.1□□□□□ -1.43
MMP3P08254 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC6.1□□□□□ -1.43
MMP3P08254 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.1□□□□□ -1.43
MMP3P08254 AC018690.1-201ENST00000608144 626 ntBASIC6.1□□□□□ -1.43
MMP3P08254 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
MMP3P08254 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
MMP3P08254 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
MMP3P08254 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.1□□□□□ -1.43
MMP3P08254 TANK-205ENST00000405852 2155 ntTSL 5 BASIC6.1□□□□□ -1.43
MMP3P08254 OR55B1P-203ENST00000641518 2602 ntBASIC6.1□□□□□ -1.43
MMP3P08254 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
MMP3P08254 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
MMP3P08254 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
MMP3P08254 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.09□□□□□ -1.43
MMP3P08254 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
MMP3P08254 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
MMP3P08254 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
MMP3P08254 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
MMP3P08254 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
MMP3P08254 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.09□□□□□ -1.43
MMP3P08254 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
MMP3P08254 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
MMP3P08254 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
MMP3P08254 AL590762.3-201ENST00000436372 640 ntBASIC6.09□□□□□ -1.43
MMP3P08254 PSMD10P3-201ENST00000437000 448 ntBASIC6.09□□□□□ -1.43
MMP3P08254 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC6.09□□□□□ -1.43
MMP3P08254 SNRPCP2-201ENST00000504370 475 ntBASIC6.09□□□□□ -1.43
MMP3P08254 MTND3P3-201ENST00000505004 126 ntBASIC6.09□□□□□ -1.43
MMP3P08254 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC6.09□□□□□ -1.43
MMP3P08254 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
MMP3P08254 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC6.09□□□□□ -1.43
MMP3P08254 AC127381.1-201ENST00000555979 939 ntBASIC6.09□□□□□ -1.43
MMP3P08254 NMNAT1P5-201ENST00000559657 841 ntBASIC6.09□□□□□ -1.43
MMP3P08254 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC6.09□□□□□ -1.43
MMP3P08254 AL390726.5-202ENST00000564800 256 ntBASIC6.09□□□□□ -1.43
MMP3P08254 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.09□□□□□ -1.43
MMP3P08254 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC6.09□□□□□ -1.43
MMP3P08254 MIR6748-201ENST00000610433 71 ntBASIC6.09□□□□□ -1.43
MMP3P08254 AC008833.1-201ENST00000611633 691 ntBASIC6.09□□□□□ -1.43
MMP3P08254 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
MMP3P08254 AC080188.3-201ENST00000624842 748 ntBASIC6.09□□□□□ -1.43
MMP3P08254 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC6.09□□□□□ -1.43
MMP3P08254 AC074101.1-201ENST00000637861 241 ntBASIC6.09□□□□□ -1.43
MMP3P08254 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
MMP3P08254 AC144833.1-201ENST00000567953 4089 ntBASIC6.09□□□□□ -1.43
MMP3P08254 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
MMP3P08254 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.09□□□□□ -1.44
MMP3P08254 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.44
MMP3P08254 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
MMP3P08254 OR51C1P-202ENST00000641159 1444 ntBASIC6.08□□□□□ -1.44
MMP3P08254 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
MMP3P08254 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.08□□□□□ -1.44
MMP3P08254 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
MMP3P08254 RNU1-59P-201ENST00000364829 162 ntBASIC6.08□□□□□ -1.44
MMP3P08254 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC6.08□□□□□ -1.44
MMP3P08254 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
MMP3P08254 OR4K12P-201ENST00000406538 961 ntBASIC6.08□□□□□ -1.44
MMP3P08254 RNA5SP487-201ENST00000410186 122 ntBASIC6.08□□□□□ -1.44
MMP3P08254 Y_RNA.625-201ENST00000411256 107 ntBASIC6.08□□□□□ -1.44
MMP3P08254 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC6.08□□□□□ -1.44
MMP3P08254 AL590762.4-201ENST00000425885 253 ntBASIC6.08□□□□□ -1.44
MMP3P08254 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC6.08□□□□□ -1.44
MMP3P08254 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC6.08□□□□□ -1.44
MMP3P08254 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC6.08□□□□□ -1.44
MMP3P08254 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.08□□□□□ -1.44
MMP3P08254 CEACAMP7-201ENST00000444105 496 ntBASIC6.08□□□□□ -1.44
MMP3P08254 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC6.08□□□□□ -1.44
MMP3P08254 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC6.08□□□□□ -1.44
MMP3P08254 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC6.08□□□□□ -1.44
MMP3P08254 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC6.08□□□□□ -1.44
MMP3P08254 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.08□□□□□ -1.44
MMP3P08254 RNU6-467P-201ENST00000517027 110 ntBASIC6.08□□□□□ -1.44
MMP3P08254 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC6.08□□□□□ -1.44
MMP3P08254 OR5D2P-201ENST00000524390 911 ntBASIC6.08□□□□□ -1.44
MMP3P08254 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC6.08□□□□□ -1.44
MMP3P08254 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
MMP3P08254 AC006116.3-201ENST00000592968 361 ntBASIC6.08□□□□□ -1.44
MMP3P08254 AP002884.5-201ENST00000595053 1132 ntBASIC6.08□□□□□ -1.44
MMP3P08254 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.08□□□□□ -1.44
MMP3P08254 U1.25-201ENST00000614085 162 ntBASIC6.08□□□□□ -1.44
MMP3P08254 U1.34-201ENST00000618578 162 ntBASIC6.08□□□□□ -1.44
MMP3P08254 AC090527.3-201ENST00000619041 548 ntBASIC6.08□□□□□ -1.44
MMP3P08254 U1.31-201ENST00000620022 160 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms