Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.31□□□□□ -1.56
SNX3O60493 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.31□□□□□ -1.56
SNX3O60493 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.31□□□□□ -1.56
SNX3O60493 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.31□□□□□ -1.56
SNX3O60493 QTRT1P1-201ENST00000604344 1078 ntBASIC5.31□□□□□ -1.56
SNX3O60493 RNU6-84P-201ENST00000607737 102 ntBASIC5.31□□□□□ -1.56
SNX3O60493 AC241377.1-201ENST00000619797 406 ntBASIC5.31□□□□□ -1.56
SNX3O60493 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SNX3O60493 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.31□□□□□ -1.56
SNX3O60493 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SNX3O60493 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SNX3O60493 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
SNX3O60493 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
SNX3O60493 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.3□□□□□ -1.56
SNX3O60493 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.3□□□□□ -1.56
SNX3O60493 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.3□□□□□ -1.56
SNX3O60493 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.3□□□□□ -1.56
SNX3O60493 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.3□□□□□ -1.56
SNX3O60493 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
SNX3O60493 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.3□□□□□ -1.56
SNX3O60493 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SNX3O60493 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SNX3O60493 PSMA6P1-201ENST00000400275 741 ntBASIC5.3□□□□□ -1.56
SNX3O60493 AL035422.1-201ENST00000414193 397 ntBASIC5.3□□□□□ -1.56
SNX3O60493 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SNX3O60493 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.3□□□□□ -1.56
SNX3O60493 AKR1B10P1-201ENST00000425765 942 ntBASIC5.3□□□□□ -1.56
SNX3O60493 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.3□□□□□ -1.56
SNX3O60493 RPL35AP21-201ENST00000437667 333 ntBASIC5.3□□□□□ -1.56
SNX3O60493 AC006335.2-201ENST00000437993 330 ntBASIC5.3□□□□□ -1.56
SNX3O60493 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.3□□□□□ -1.56
SNX3O60493 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.3□□□□□ -1.56
SNX3O60493 AC063955.1-201ENST00000462872 685 ntBASIC5.3□□□□□ -1.56
SNX3O60493 OR9N1P-201ENST00000491296 333 ntBASIC5.3□□□□□ -1.56
SNX3O60493 RN7SL346P-201ENST00000491561 294 ntBASIC5.3□□□□□ -1.56
SNX3O60493 AC109464.1-201ENST00000511091 819 ntBASIC5.3□□□□□ -1.56
SNX3O60493 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.3□□□□□ -1.56
SNX3O60493 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.3□□□□□ -1.56
SNX3O60493 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC5.3□□□□□ -1.56
SNX3O60493 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC5.3□□□□□ -1.56
SNX3O60493 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.3□□□□□ -1.56
SNX3O60493 AC087272.1-201ENST00000523624 533 ntBASIC5.3□□□□□ -1.56
SNX3O60493 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.3□□□□□ -1.56
SNX3O60493 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
SNX3O60493 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.3□□□□□ -1.56
SNX3O60493 AL356801.1-201ENST00000559320 294 ntBASIC5.3□□□□□ -1.56
SNX3O60493 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.3□□□□□ -1.56
SNX3O60493 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC5.3□□□□□ -1.56
SNX3O60493 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC5.3□□□□□ -1.56
SNX3O60493 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC5.3□□□□□ -1.56
SNX3O60493 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.3□□□□□ -1.56
SNX3O60493 AL512413.1-201ENST00000606489 382 ntBASIC5.3□□□□□ -1.56
SNX3O60493 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.3□□□□□ -1.56
SNX3O60493 AC109583.2-201ENST00000617367 129 ntBASIC5.3□□□□□ -1.56
SNX3O60493 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.3□□□□□ -1.56
SNX3O60493 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.3□□□□□ -1.56
SNX3O60493 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.3□□□□□ -1.56
SNX3O60493 AC129915.3-201ENST00000634128 948 ntBASIC5.3□□□□□ -1.56
SNX3O60493 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SNX3O60493 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
SNX3O60493 AC012078.1-201ENST00000405035 1646 ntBASIC5.3□□□□□ -1.56
SNX3O60493 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SNX3O60493 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
SNX3O60493 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
SNX3O60493 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SNX3O60493 NAMPTP1-201ENST00000440465 2514 ntBASIC5.29□□□□□ -1.56
SNX3O60493 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
SNX3O60493 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
SNX3O60493 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SNX3O60493 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SNX3O60493 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SNX3O60493 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SNX3O60493 EI24P3-201ENST00000399046 1062 ntBASIC5.29□□□□□ -1.56
SNX3O60493 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.29□□□□□ -1.56
SNX3O60493 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.29□□□□□ -1.56
SNX3O60493 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.29□□□□□ -1.56
SNX3O60493 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.29□□□□□ -1.56
SNX3O60493 RPL36AP10-201ENST00000421785 322 ntBASIC5.29□□□□□ -1.56
SNX3O60493 RPL7AP51-201ENST00000422016 760 ntBASIC5.29□□□□□ -1.56
SNX3O60493 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.29□□□□□ -1.56
SNX3O60493 AC092865.3-201ENST00000425390 1026 ntBASIC5.29□□□□□ -1.56
SNX3O60493 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.29□□□□□ -1.56
SNX3O60493 AL606490.8-201ENST00000441624 319 ntBASIC5.29□□□□□ -1.56
SNX3O60493 NOP56P2-201ENST00000447491 769 ntBASIC5.29□□□□□ -1.56
SNX3O60493 TREML3P-201ENST00000457327 501 ntBASIC5.29□□□□□ -1.56
SNX3O60493 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SNX3O60493 AC105918.1-201ENST00000474399 838 ntBASIC5.29□□□□□ -1.56
SNX3O60493 AC005017.1-201ENST00000482002 490 ntBASIC5.29□□□□□ -1.56
SNX3O60493 AC022133.1-201ENST00000490961 571 ntBASIC5.29□□□□□ -1.56
SNX3O60493 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.29□□□□□ -1.56
SNX3O60493 AL158068.1-201ENST00000506116 616 ntBASIC5.29□□□□□ -1.56
SNX3O60493 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SNX3O60493 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC5.29□□□□□ -1.56
SNX3O60493 RNA5SP303-201ENST00000516192 130 ntBASIC5.29□□□□□ -1.56
SNX3O60493 AP002981.1-201ENST00000517692 975 ntBASIC5.29□□□□□ -1.56
SNX3O60493 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.29□□□□□ -1.56
SNX3O60493 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.29□□□□□ -1.56
SNX3O60493 BCAS2P1-201ENST00000528022 632 ntBASIC5.29□□□□□ -1.56
SNX3O60493 HMGN2P36-201ENST00000529541 409 ntBASIC5.29□□□□□ -1.56
SNX3O60493 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 150.2 ms