Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 RNU4-2-201ENST00000365668 141 ntBASIC4.52□□□□□ -1.69
SDCBPO00560 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SDCBPO00560 AC211486.3-201ENST00000412694 621 ntBASIC4.52□□□□□ -1.69
SDCBPO00560 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.52□□□□□ -1.69
SDCBPO00560 AKR1B10P1-201ENST00000425765 942 ntBASIC4.52□□□□□ -1.69
SDCBPO00560 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.52□□□□□ -1.69
SDCBPO00560 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.52□□□□□ -1.69
SDCBPO00560 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.52□□□□□ -1.69
SDCBPO00560 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.52□□□□□ -1.69
SDCBPO00560 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC4.52□□□□□ -1.69
SDCBPO00560 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SDCBPO00560 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC4.52□□□□□ -1.69
SDCBPO00560 GAPDHP14-201ENST00000450472 937 ntBASIC4.52□□□□□ -1.69
SDCBPO00560 AC021660.1-201ENST00000465006 554 ntBASIC4.52□□□□□ -1.69
SDCBPO00560 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
SDCBPO00560 RN7SL273P-201ENST00000481561 299 ntBASIC4.52□□□□□ -1.69
SDCBPO00560 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC4.52□□□□□ -1.69
SDCBPO00560 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.52□□□□□ -1.69
SDCBPO00560 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.52□□□□□ -1.69
SDCBPO00560 AC040958.1-201ENST00000561102 201 ntBASIC4.52□□□□□ -1.69
SDCBPO00560 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.52□□□□□ -1.69
SDCBPO00560 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.52□□□□□ -1.69
SDCBPO00560 AL359742.1-201ENST00000622497 540 ntBASIC4.52□□□□□ -1.69
SDCBPO00560 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SDCBPO00560 AC097063.1-201ENST00000426714 1797 ntBASIC4.52□□□□□ -1.69
SDCBPO00560 THAP12P5-201ENST00000405864 2275 ntBASIC4.52□□□□□ -1.69
SDCBPO00560 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SDCBPO00560 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.52□□□□□ -1.69
SDCBPO00560 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SDCBPO00560 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
SDCBPO00560 OR13C1P-202ENST00000641378 2919 ntBASIC4.51□□□□□ -1.69
SDCBPO00560 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
SDCBPO00560 SMG1P7-201ENST00000565246 2704 ntBASIC4.51□□□□□ -1.69
SDCBPO00560 OR9G4-201ENST00000302957 984 ntBASIC4.51□□□□□ -1.69
SDCBPO00560 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
SDCBPO00560 RNA5SP46-201ENST00000362370 120 ntBASIC4.51□□□□□ -1.69
SDCBPO00560 RN7SKP28-201ENST00000364770 305 ntBASIC4.51□□□□□ -1.69
SDCBPO00560 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
SDCBPO00560 RNA5SP284-201ENST00000384547 118 ntBASIC4.51□□□□□ -1.69
SDCBPO00560 PCNPP4-201ENST00000414817 517 ntBASIC4.51□□□□□ -1.69
SDCBPO00560 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.51□□□□□ -1.69
SDCBPO00560 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.51□□□□□ -1.69
SDCBPO00560 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC4.51□□□□□ -1.69
SDCBPO00560 AC093155.2-201ENST00000420734 937 ntBASIC4.51□□□□□ -1.69
SDCBPO00560 KCTD9P1-201ENST00000430462 1167 ntBASIC4.51□□□□□ -1.69
SDCBPO00560 FMO7P-201ENST00000436045 768 ntBASIC4.51□□□□□ -1.69
SDCBPO00560 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.51□□□□□ -1.69
SDCBPO00560 RPL12P18-201ENST00000437175 325 ntBASIC4.51□□□□□ -1.69
SDCBPO00560 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC4.51□□□□□ -1.69
SDCBPO00560 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC4.51□□□□□ -1.69
SDCBPO00560 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.51□□□□□ -1.69
SDCBPO00560 RN7SL72P-201ENST00000460697 269 ntBASIC4.51□□□□□ -1.69
SDCBPO00560 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SDCBPO00560 RPL15P21-201ENST00000495592 567 ntBASIC4.51□□□□□ -1.69
SDCBPO00560 MTND6P2-201ENST00000512226 524 ntBASIC4.51□□□□□ -1.69
SDCBPO00560 SNORD46.2-201ENST00000516021 102 ntBASIC4.51□□□□□ -1.69
SDCBPO00560 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC4.51□□□□□ -1.69
SDCBPO00560 AC112191.2-201ENST00000522428 333 ntBASIC4.51□□□□□ -1.69
SDCBPO00560 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.51□□□□□ -1.69
SDCBPO00560 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.51□□□□□ -1.69
SDCBPO00560 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.51□□□□□ -1.69
SDCBPO00560 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.51□□□□□ -1.69
SDCBPO00560 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC4.51□□□□□ -1.69
SDCBPO00560 NDUFA5P11-201ENST00000567995 343 ntBASIC4.51□□□□□ -1.69
SDCBPO00560 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC4.51□□□□□ -1.69
SDCBPO00560 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.51□□□□□ -1.69
SDCBPO00560 AC012616.1-201ENST00000600294 197 ntBASIC4.51□□□□□ -1.69
SDCBPO00560 AC009027.1-201ENST00000604510 479 ntBASIC4.51□□□□□ -1.69
SDCBPO00560 MIR6778-201ENST00000617912 73 ntBASIC4.51□□□□□ -1.69
SDCBPO00560 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SDCBPO00560 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.51□□□□□ -1.69
SDCBPO00560 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.51□□□□□ -1.69
SDCBPO00560 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SDCBPO00560 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SDCBPO00560 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.51□□□□□ -1.69
SDCBPO00560 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SDCBPO00560 HSPA8P14-201ENST00000552265 1805 ntBASIC4.51□□□□□ -1.69
SDCBPO00560 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SDCBPO00560 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SDCBPO00560 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.5□□□□□ -1.69
SDCBPO00560 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SDCBPO00560 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SDCBPO00560 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SDCBPO00560 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
SDCBPO00560 AC063976.2-201ENST00000425667 3556 ntBASIC4.5□□□□□ -1.69
SDCBPO00560 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC4.5□□□□□ -1.69
SDCBPO00560 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SDCBPO00560 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC4.5□□□□□ -1.69
SDCBPO00560 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SDCBPO00560 RNA5SP122-201ENST00000384457 108 ntBASIC4.5□□□□□ -1.69
SDCBPO00560 SSR1P1-201ENST00000407630 814 ntBASIC4.5□□□□□ -1.69
SDCBPO00560 OR6E1P-201ENST00000414424 923 ntBASIC4.5□□□□□ -1.69
SDCBPO00560 Z93019.1-201ENST00000416450 973 ntBASIC4.5□□□□□ -1.69
SDCBPO00560 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.5□□□□□ -1.69
SDCBPO00560 TNPO1P1-201ENST00000423641 1138 ntBASIC4.5□□□□□ -1.69
SDCBPO00560 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.5□□□□□ -1.69
SDCBPO00560 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC4.5□□□□□ -1.69
SDCBPO00560 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.5□□□□□ -1.69
SDCBPO00560 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SDCBPO00560 RPL36AP39-201ENST00000445859 318 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms