Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.69□□□□□ -1.5
SMIM28A0A1B0GU29 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.69□□□□□ -1.5
SMIM28A0A1B0GU29 RN7SL329P-201ENST00000467740 299 ntBASIC5.69□□□□□ -1.5
SMIM28A0A1B0GU29 RPL7AP6-201ENST00000477943 801 ntBASIC5.69□□□□□ -1.5
SMIM28A0A1B0GU29 IGBP1P4-201ENST00000503202 879 ntBASIC5.69□□□□□ -1.5
SMIM28A0A1B0GU29 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.69□□□□□ -1.5
SMIM28A0A1B0GU29 GTF2F2P1-201ENST00000511083 675 ntBASIC5.69□□□□□ -1.5
SMIM28A0A1B0GU29 HMGN1P9-201ENST00000515212 298 ntBASIC5.69□□□□□ -1.5
SMIM28A0A1B0GU29 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC5.69□□□□□ -1.5
SMIM28A0A1B0GU29 SETP3-201ENST00000581726 813 ntBASIC5.69□□□□□ -1.5
SMIM28A0A1B0GU29 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.69□□□□□ -1.5
SMIM28A0A1B0GU29 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.69□□□□□ -1.5
SMIM28A0A1B0GU29 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.69□□□□□ -1.5
SMIM28A0A1B0GU29 AC087763.1-201ENST00000603391 286 ntBASIC5.69□□□□□ -1.5
SMIM28A0A1B0GU29 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.69□□□□□ -1.5
SMIM28A0A1B0GU29 AC099494.2-201ENST00000623371 978 ntBASIC5.69□□□□□ -1.5
SMIM28A0A1B0GU29 MTCO1P1-201ENST00000624263 1081 ntBASIC5.69□□□□□ -1.5
SMIM28A0A1B0GU29 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SMIM28A0A1B0GU29 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SMIM28A0A1B0GU29 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
SMIM28A0A1B0GU29 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SMIM28A0A1B0GU29 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.69□□□□□ -1.5
SMIM28A0A1B0GU29 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SMIM28A0A1B0GU29 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SMIM28A0A1B0GU29 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SMIM28A0A1B0GU29 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
SMIM28A0A1B0GU29 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.69□□□□□ -1.5
SMIM28A0A1B0GU29 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SMIM28A0A1B0GU29 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SMIM28A0A1B0GU29 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
SMIM28A0A1B0GU29 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.69□□□□□ -1.5
SMIM28A0A1B0GU29 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SMIM28A0A1B0GU29 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
SMIM28A0A1B0GU29 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SMIM28A0A1B0GU29 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SMIM28A0A1B0GU29 AC114947.2-201ENST00000565748 2125 ntBASIC5.68□□□□□ -1.5
SMIM28A0A1B0GU29 AL034549.2-201ENST00000618285 3373 ntBASIC5.68□□□□□ -1.5
SMIM28A0A1B0GU29 AC079298.1-201ENST00000625026 1619 ntBASIC5.68□□□□□ -1.5
SMIM28A0A1B0GU29 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SMIM28A0A1B0GU29 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SMIM28A0A1B0GU29 MIR600-201ENST00000385007 98 ntBASIC5.68□□□□□ -1.5
SMIM28A0A1B0GU29 NUDT19P3-201ENST00000404698 555 ntBASIC5.68□□□□□ -1.5
SMIM28A0A1B0GU29 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SMIM28A0A1B0GU29 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.68□□□□□ -1.5
SMIM28A0A1B0GU29 AC211486.3-201ENST00000412694 621 ntBASIC5.68□□□□□ -1.5
SMIM28A0A1B0GU29 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.68□□□□□ -1.5
SMIM28A0A1B0GU29 EI24P4-201ENST00000423683 1078 ntBASIC5.68□□□□□ -1.5
SMIM28A0A1B0GU29 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SMIM28A0A1B0GU29 RPS4XP16-201ENST00000427198 791 ntBASIC5.68□□□□□ -1.5
SMIM28A0A1B0GU29 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.68□□□□□ -1.5
SMIM28A0A1B0GU29 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.68□□□□□ -1.5
SMIM28A0A1B0GU29 AC099670.2-201ENST00000435130 321 ntBASIC5.68□□□□□ -1.5
SMIM28A0A1B0GU29 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.68□□□□□ -1.5
SMIM28A0A1B0GU29 RN7SL610P-201ENST00000463845 291 ntBASIC5.68□□□□□ -1.5
SMIM28A0A1B0GU29 AC090114.3-201ENST00000479267 829 ntBASIC5.68□□□□□ -1.5
SMIM28A0A1B0GU29 AC109462.1-201ENST00000491087 368 ntBASIC5.68□□□□□ -1.5
SMIM28A0A1B0GU29 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.68□□□□□ -1.5
SMIM28A0A1B0GU29 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.68□□□□□ -1.5
SMIM28A0A1B0GU29 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.68□□□□□ -1.5
SMIM28A0A1B0GU29 AC012400.1-201ENST00000518452 381 ntBASIC5.68□□□□□ -1.5
SMIM28A0A1B0GU29 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.68□□□□□ -1.5
SMIM28A0A1B0GU29 MRPS21P9-201ENST00000571150 257 ntBASIC5.68□□□□□ -1.5
SMIM28A0A1B0GU29 RN7SL708P-201ENST00000580952 299 ntBASIC5.68□□□□□ -1.5
SMIM28A0A1B0GU29 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
SMIM28A0A1B0GU29 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.68□□□□□ -1.5
SMIM28A0A1B0GU29 AC009163.6-201ENST00000612367 342 ntBASIC5.68□□□□□ -1.5
SMIM28A0A1B0GU29 AC118658.2-201ENST00000618697 459 ntBASIC5.68□□□□□ -1.5
SMIM28A0A1B0GU29 AC068870.2-201ENST00000620635 389 ntBASIC5.68□□□□□ -1.5
SMIM28A0A1B0GU29 CASC19-222ENST00000641321 1173 ntBASIC5.68□□□□□ -1.5
SMIM28A0A1B0GU29 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SMIM28A0A1B0GU29 AC092070.2-203ENST00000598377 3644 ntBASIC5.68□□□□□ -1.5
SMIM28A0A1B0GU29 AL137058.3-201ENST00000624531 3099 ntBASIC5.68□□□□□ -1.5
SMIM28A0A1B0GU29 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SMIM28A0A1B0GU29 AC007342.5-201ENST00000571340 2142 ntBASIC5.68□□□□□ -1.5
SMIM28A0A1B0GU29 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SMIM28A0A1B0GU29 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SMIM28A0A1B0GU29 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SMIM28A0A1B0GU29 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.67□□□□□ -1.5
SMIM28A0A1B0GU29 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
SMIM28A0A1B0GU29 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.67□□□□□ -1.5
SMIM28A0A1B0GU29 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.67□□□□□ -1.5
SMIM28A0A1B0GU29 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SMIM28A0A1B0GU29 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
SMIM28A0A1B0GU29 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
SMIM28A0A1B0GU29 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SMIM28A0A1B0GU29 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SMIM28A0A1B0GU29 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.67□□□□□ -1.5
SMIM28A0A1B0GU29 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
SMIM28A0A1B0GU29 RNA5SP305-201ENST00000362665 119 ntBASIC5.67□□□□□ -1.5
SMIM28A0A1B0GU29 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SMIM28A0A1B0GU29 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SMIM28A0A1B0GU29 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.67□□□□□ -1.5
SMIM28A0A1B0GU29 AC016769.2-201ENST00000414815 475 ntBASIC5.67□□□□□ -1.5
SMIM28A0A1B0GU29 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.67□□□□□ -1.5
SMIM28A0A1B0GU29 AC017019.1-201ENST00000426129 261 ntBASIC5.67□□□□□ -1.5
SMIM28A0A1B0GU29 NPM1P22-201ENST00000427761 952 ntBASIC5.67□□□□□ -1.5
SMIM28A0A1B0GU29 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.67□□□□□ -1.5
SMIM28A0A1B0GU29 CEACAMP7-201ENST00000444105 496 ntBASIC5.67□□□□□ -1.5
SMIM28A0A1B0GU29 AC073850.1-201ENST00000449243 255 ntBASIC5.67□□□□□ -1.5
SMIM28A0A1B0GU29 AC092647.2-201ENST00000452998 253 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms